Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02508 ATGGGGATTGATTACTATAAAATCCTTCAAGTAGATCGAAATGCTAAAGATGATGATCTCAAGAAAGCTTATCGCAAACTTGCTATGAAGTGGCACCCTGATAAGAACCCTAATAATAAGAAAGATGCTGAAGCCAAATTCAAGCAAATCTCAGAAGCttatgatGTTTTAAGTGATCCACAAAAGAGAGCTGTGTATGATCAGTATGGTGAGGAGGGATTGAAGGGCCAGATGCCTCCCCCTGGTGCAGGTGGATTTTCTGATGCCGGTGATGGTGGGCCGACCATGTTCCGGTTCAACCCGAGAAGTGCGGATGACATATTTTCGGAATTCTTCGGATTTTCCAAACCGTTCGGCGGTGGAATGGGTGATATGGGAGGTCATCCCGGTGCATCTGGCTTTCCGAGGGGTATGTTTAGGGATGACCTTTTCTCTTCTTTTAGGAGTGCGGCCGGTGAAGGATCTGGCAATGTGCCGAGGAAAAGTGCACCGATAGAGAGAACATTGCCTTGCAGTTTGGAGGATTTGTATAAAGGGACTACCAAAAAAATGAAGATTTCCCGGGATGTTAGCGATTCCAGCGGGAAGCCAACCACAGTAGAGGAAATTCTAACCATTGAGATCAAGCCAGGTTGGAAGAAAGGAACGAAAATAACTTTTCCGGAGAAGGGAAACGAACAAAGAGGACTTATACCAGCAGATCTTGTTTTCATTATCGACGAAAAGCCTCACAGCGTCTTCAAGAGGGATGGCAATGATCTTGTCGTCACACAGAAAATCTCTCTTGTAGAAGCTCTCACAGGTTACACCACACAAATAACAACCCTCGATGGAAGGAATCTTTCGATCTCCGTCAACACCATCATTAGTACATCGTACGAAGAAGTTGTTAAAGGAGAAGGTATGCCGATTCCTAAGGAACCTTCGAAAAAGGGAAACTTGAGAGTCAAGTTTAACATCAAGTTTCCATCTAGACTTACATCGGAGCAGAAAACCGGCATCAAGCGATTACTGACGTCTCCGTAA 1026 0.4454 MGIDYYKILQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPGAGGFSDAGDGGPTMFRFNPRSADDIFSEFFGFSKPFGGGMGDMGGHPGASGFPRGMFRDDLFSSFRSAAGEGSGNVPRKSAPIERTLPCSLEDLYKGTTKKMKISRDVSDSSGKPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGLIPADLVFIIDEKPHSVFKRDGNDLVVTQKISLVEALTGYTTQITTLDGRNLSISVNTIISTSYEEVVKGEGMPIPKEPSKKGNLRVKFNIKFPSRLTSEQKTGIKRLLTSP 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02508 341 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 339 - -
Car06g02508 341 Gene3D - 244 324 - -
Car06g02508 341 CDD DnaJ 4 59 IPR001623 -
Car06g02508 341 MobiDBLite consensus disorder prediction 73 92 - -
Car06g02508 341 SUPERFAMILY Chaperone J-domain 3 98 IPR036869 -
Car06g02508 341 PRINTS DnaJ domain signature 6 24 IPR001623 -
Car06g02508 341 PRINTS DnaJ domain signature 24 39 IPR001623 -
Car06g02508 341 PRINTS DnaJ domain signature 42 62 IPR001623 -
Car06g02508 341 PRINTS DnaJ domain signature 62 81 IPR001623 -
Car06g02508 341 Pfam DnaJ C terminal domain 165 323 IPR002939 -
Car06g02508 341 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Car06g02508 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 165 244 IPR008971 GO:0006457|GO:0051082
Car06g02508 341 SMART dnaj_3 3 62 IPR001623 -
Car06g02508 341 Pfam DnaJ domain 4 67 IPR001623 -
Car06g02508 341 Gene3D DnaJ domain 3 122 IPR036869 -
Car06g02508 341 CDD DnaJ_C 163 326 - -
Car06g02508 341 Gene3D - 164 242 - -
Car06g02508 341 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 - -
Car06g02508 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 246 332 IPR008971 GO:0006457|GO:0051082
Car06g02508 341 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02508 Car-Chr6 29072049 29075968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02508 5 69 C2H2 Transcription Factor Family AT1G74250 36.232 2.75e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02508 K09510 - gmx:100777607 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02508 06 29072049 29075968 Car06g02508 06 29072049 29075968 ECH