Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02505 ATGGAGGGTCATCAATTTCATCacaaaaaccaaaggcgacaacagcaacagcagcaacaacaacaacaaAATATTCATCAGAATATCAATACGGTTAATGTTGATGTTTCTGATAGATTCCCTCAATGGAGCATCGAAGAGACAAAGGTGTTTCTTATGTTAAGAGGAGAACTAGATCAAGCTTTCATGGAGACTAAAAGGAACAAACAATTGTGGGAAGTTATCGCTAACCATATGAAAGAAAATGGTTATTATAGAAGTGCAGAACAGTGTAAGTGCAAGTGGAAAAACCTTGTTACCCGCTATAAGGGATGTGAAACAATGGACACAGAAGTGTTGAGACATCAATTTCCATTTTACAATGAACTTCAAGCAATTTTCACAGCAAGGATGCAGAGAATGTTGTGGGCGGAAGCCGAAGATGGATCGAAGAAAAAGGCGACAGAGATTTCGACCGATGACGAAGATGACAACGAAGAGAATGAGACAGTATCTCAAAAGGGTAGCAATAGAAAGAAGAAAAAAGCTAAGACAGTTAGCGAAAGTGGCGGCGTTAGCAACAACAATTTGAAGGAAATTTTGGATGATTTCATGAGGCAAATGCTACAAATTGAAGCACAGTGGATGGAATCATTTGAAGCTAGAGAGAATGAAAGGAGGTTGAGGGAAATGGAATGGAGGCAACAAATGGAAGTGTTGGAGAATGAGAGGATATTGATGGAACAAAGATGGAGAGAAAGGGAAGAACAAAGGATGATTAGAGAAGAAGCTAGAGCTGAGAAGAGAGATGCTTTAATAAGAGCTCTGTTAAACAAGTTAGAAAGACAATAG 831 0.3658 MEGHQFHHKNQRRQQQQQQQQQQNIHQNINTVNVDVSDRFPQWSIEETKVFLMLRGELDQAFMETKRNKQLWEVIANHMKENGYYRSAEQCKCKWKNLVTRYKGCETMDTEVLRHQFPFYNELQAIFTARMQRMLWAEAEDGSKKKATEISTDDEDDNEENETVSQKGSNRKKKKAKTVSESGGVSNNNLKEILDDFMRQMLQIEAQWMESFEARENERRLREMEWRQQMEVLENERILMEQRWREREEQRMIREEARAEKRDALIRALLNKLERQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02505 276 MobiDBLite consensus disorder prediction 1 24 - -
Car06g02505 276 MobiDBLite consensus disorder prediction 162 179 - -
Car06g02505 276 PANTHER - 1 276 - -
Car06g02505 276 MobiDBLite consensus disorder prediction 142 185 - -
Car06g02505 276 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 276 - -
Car06g02505 276 SMART sant 39 101 IPR001005 -
Car06g02505 276 Gene3D - 43 104 - -
Car06g02505 276 ProSiteProfiles Myb-like domain profile. 43 99 IPR001005 -
Car06g02505 276 CDD GT1 41 106 - -
Car06g02505 276 Coils Coil 223 243 - -
Car06g02505 276 Pfam Myb/SANT-like DNA-binding domain 42 126 IPR044822 -
Car06g02505 276 Coils Coil 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02505 Car-Chr6 28926601 28928529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02505 34 275 Trihelix Transcription Factor Family AT2G38250 54.941 1.03e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car06g02505 Myb_DNA-bind_4 8.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02505 - - gmx:100818384 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02505 06 28926601 28928529 Car06g02505 06 28926601 28928529 ECH