Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02499 ATGCGCAAGTCCTTCAAGGATTCTCTCAAAGCTCTTGAAGCTGACATTCAATTTGCCAATACTCTAGCTTCTGATTATCCAAGAGAAGATGATGGAGCCTGCTTTCAAATGAGATTGTCTTATAGCCCAGCTGCTCAATTTCTTATGTTTCTGGTTCAGTGGACTGATTGCCATCTTGCTGGAGCCCTAGGGTTTCTTAGAATTCTCATATACAAGGTATATGATGATGGTAAGACAACTATGTCCATTTATGAAAGAAAAGCCAGTCTAAAGGAGTTCTATGGTATGATCTTTCCCTCTTTATTACAACTCAACAGAGGAATCACTGATGTAGAAGAGAGGAAACAAAAGGACTTATGTGCTACAAAGTACAAGCCTAAAGATGTGATTAGAAAAGGAAAGTTGTCTGAAATTGATATAGAGAGAGAAGAAGAATGTCCTATTTGTATGGAGATGAACAACAAGGTTGTGTTACCAAATTGCAACCATTCCTTCTGCATGAAATGCTATAATGACTGGCATACAATATCTCAATCTTGCCCTTTCTGCCGCGACAGTCTTACAAGAGTAAACTCAGGTGACCTTTGGATCTACACGAGCAGCAATGAGATAGATGATTTAGCATCAATCAACAAAGAGAATTTGAAAAGGCTATTTATGTACATTGACAAGTTGCCTCTGGTTTTGCCAGATCAAATATTCGCGACTTATCCTCGACACTTTTGA 726 0.3857 MRKSFKDSLKALEADIQFANTLASDYPREDDGACFQMRLSYSPAAQFLMFLVQWTDCHLAGALGFLRILIYKVYDDGKTTMSIYERKASLKEFYGMIFPSLLQLNRGITDVEERKQKDLCATKYKPKDVIRKGKLSEIDIEREEECPICMEMNNKVVLPNCNHSFCMKCYNDWHTISQSCPFCRDSLTRVNSGDLWIYTSSNEIDDLASINKENLKRLFMYIDKLPLVLPDQIFATYPRHF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02499 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 193 IPR013083 -
Car06g02499 241 SMART ring_2 146 183 IPR001841 -
Car06g02499 241 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Car06g02499 241 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 229 - -
Car06g02499 241 SUPERFAMILY RING/U-box 134 189 - -
Car06g02499 241 PANTHER RING FINGER PROTEIN 41, 151 1 229 - -
Car06g02499 241 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
Car06g02499 241 Pfam Zinc finger, C3HC4 type (RING finger) 143 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02499 Car-Chr6 28661936 28665300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02499 94 184 C3H Transcription Factor Family AT5G01960 30.208 1.09e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02499 K25840 - zju:107430836 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02499 06 28661936 28665300 Car06g02499 06 28661936 28665300 ECH