Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02486 aTGCCTTCTTCTTCCACAACCATAGTTTCCAAATGCACAATCTACCCCGATCAAAAATCATCAATAAAACCTTTAAAACTCTCTGTTTCTGATCTCCCAATGCTTTCATGTCACTACATACAAAAAGGTATTTTACTTTCTACACCCCCTTATTCCTTTGAAAACCTAATTTCCACTCTCAAACActctctttcaatttctctctctcacttccctcctctcGCCGGTAGACTCACCACCGATTCCGACGGTTACGTTTACATCACCTGTAACGACGCCGGTGTCGATTTCATTCACTCCAAAGCCAAACACTTAACACTAAACGCCATCATTTCACCTTCTCTTCTCGATGTTCATCCTTGCTTCAAAGAATTCTTCGCTCATGATATGATGATTTCTTATTCCGGTCACAATAATCCACTCGCCGCCGTTCAAATTACCGAACTCGCCGACGGTGTTTTCATAGGTTGTACTGTTAATCATTCCGTAACTGATGGAACTTCGTTTTGGCACTTCTTTAACACGTTCGCCGCAGTCACTAAAAACGCCGGCGCCGTCAAGATTTCAAACTTGCCGGATTTTACAAGAGATACAATCTTCAACTCAAACGCCGTTCTACCTATCCCCGCCGGCGGTCCTACCGTAACGTTCGACGTCAATGAACCTCTCCGTGAACGCGTCTTCCATTTCTCTCGTGAATCCATTcagaaactcaaacagaaagcaaacggttacagtaacagcaacggtaacggtTTAATAGATCCAACGGAGGAGATGAAAAAACAAGTGAACGACGGTTGGAAAAACGTTAATTCTAACGGTAACAGTAACAGAAGAACAAACGTTAGAAACGAGATCTCATCGTTTCAATCGTTATGTGCACAGTTATGGCGTTCTGTGACACGTGCGAGGAAATTAGATTTTTCCAAAACCTCGACGTTTCGTATGGCGGTGAATTGTCGTCACAGATTAGAACCAAAGATGGACGGGTTTTACTTCGGTAACGCGATTCAAAGCATCCCAACCGTTGCTTCAGTTAATGAAATAATCACGAAAGATCTAAGGTTCTGCGCTGAGCTACTTCATAAAAACGTGGTAGCACACGATAACGCTACGGTACGCCACGGAGTAGAAGATTGGGAAAATGCACCTAGGCTTTTTCCACTTGGAAATTTCGATGGTGCTATGATAACTATGGGTAGTTCACCGCGTTTTCCTATGTACGACAATGATTTTGGGTGGGGTAAACCTTTGGTTATTCGTAGTGGTAAAGCGAATAAATTTGATGGTAAAATTTCTGCTTTTCCTGGTAGAGAAGGAAATGGAAGTGTTGATCTTGAAGTCGTTTTGGCACCTCAAACTATGGATGGACTTGAAAACGACATCGATTTTATGCAGTATGTTACTCAACAAGTAGTGTGA 1425 0.3972 MPSSSTTIVSKCTIYPDQKSSIKPLKLSVSDLPMLSCHYIQKGILLSTPPYSFENLISTLKHSLSISLSHFPPLAGRLTTDSDGYVYITCNDAGVDFIHSKAKHLTLNAIISPSLLDVHPCFKEFFAHDMMISYSGHNNPLAAVQITELADGVFIGCTVNHSVTDGTSFWHFFNTFAAVTKNAGAVKISNLPDFTRDTIFNSNAVLPIPAGGPTVTFDVNEPLRERVFHFSRESIQKLKQKANGYSNSNGNGLIDPTEEMKKQVNDGWKNVNSNGNSNRRTNVRNEISSFQSLCAQLWRSVTRARKLDFSKTSTFRMAVNCRHRLEPKMDGFYFGNAIQSIPTVASVNEIITKDLRFCAELLHKNVVAHDNATVRHGVEDWENAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGKPLVIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPQTMDGLENDIDFMQYVTQQVV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02486 474 Gene3D - 221 465 IPR023213 -
Car06g02486 474 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 470 - -
Car06g02486 474 Gene3D - 6 207 IPR023213 -
Car06g02486 474 Pfam Transferase family 6 465 - -
Car06g02486 474 SUPERFAMILY CoA-dependent acyltransferases 57 182 - -
Car06g02486 474 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02486 Car-Chr6 28149085 28150608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02486 59 461 Monolignol Biosynthesis Gene Families AT5G48930 24.455 3.63e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02486 - - cam:101493121 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02486 06 28149085 28150608 Car06g02486 06 28149085 28150608 ECH