Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02478 atgggaagagaaatcattcgtgagaaatcaccaaaggaacttgagaagcgttgcaggttgtggtttaatgaggatgtcttggatgtattgtcagaacaaactggaacacaagctgttgagggagtggttttgaagttgacacctaatgccaaatgttttagtaccaaagcatttgagaacatgaagaaactcaggttgcttcaacttgctggtgtacaacttgatggagattttaaatatctttcaagaaatttgagatggctgtgttggaatggatttcctttaacatgcatacctacaaaatttgatcaaggaaaattagtttccattgagttagaaaacagcaatatcaaacttgtgtggaaagaGATGCAGatgatggagaatttgaaaattctgaatcttagtcattctcgttatctgacaaagacccccgacttttcaaacttgcccaatcttgaaaagctagtactcaaagattgtccaaggctgtctgagatttcccatacgattggacatctccataaaattctcatgataaatttgaaagattgtattagtcttcgtaaccttccacgaaccatctatacgttgaagtctctgaaaactcttattctttctgggtgtttaatagttgacgagttggaagaggacttggaacaaatggaatccttaaccattttgctcgcagataacactgcaataacaaaagtgcccttttcattattaaggtcaaaaaCCATTGGGTATATTTCTCTGTGTGGCTATAATGGATACTCACGTGAAGTATTTCCTTCTATCATTCGGTCTTGGATTTCACCAACAAATAATCTCTCATCCTTAGTTCAAACACCTGCTGGCATGTCATCTCTTGTTTCTTTAGATGCATCAAAAAGTAGTTCCCACAGTCTATCATCTATTTCTGATGTCCTTACAAAGGTTCAAAGCCTTTTGGTAGAGTGCGGCTCAGAACTTCAACTTTCACGAGATGCAATTTTAGATGCTTTAAGTGCAACAAATTCTAAGGAGTTGGAATCAATTGCAACTACATCACAAGAATCAGCTGTGAAAACTTCTACATTAATTGAATGTTGTGGTCAAGTGCACATTTCAGCAACTAAAAAATCCCAGAAGTCTCTTCTAATACAAATGGGAACGAATTGCAAAGCCGCCGATATTTTGAAAGAAAGCATCTTACAGAATATGAATGTCAATGCGGGTGGTGGTTGCTTACTCCCTGGCGATAGTTATCCAGATTGGTTAACCTTCAATTCCGAAGGTTCTTCTGTAACTTTTATAGTTCCTCAAGTGAAAGGGCGTAACTTGAAAACAATGTTGTGCCTTGTCAAATCTTCAAGCCCAGATAACATAACATGCGATGGCCTCAAAAATGTGTTGGTGATAAATCACACCAAGACCACCATTCAGCTCTATAAGAGAGAGGCATTAGCCTCCTTTGAAAATGAGGAGTGGCAGAGAGTGGTATCAAATATGGAACCTGATGACAAAGTGGAGATTGTTGCTGTTTTTTGGAGCAGTTTCATTGTGATGAAGACAACAGTTTATCTCATATATGATGAACCAATCAGTGAAATATTGAAGCAATTTCATGCACCTGATAAGAATGTTCTTGTTGGTAGTGGTGATGAAAATGTATGCGCTGCAAAGAGGATCTCTCCTCATGTAGAGCCCGCAGAAGGTTTTAAACAAAACCAGAAAAGAAGAAAATTTGACTGA 1737 0.2251 MGREIIREKSPKELEKRCRLWFNEDVLDVLSEQTGTQAVEGVVLKLTPNAKCFSTKAFENMKKLRLLQLAGVQLDGDFKYLSRNLRWLCWNGFPLTCIPTKFDQGKLVSIELENSNIKLVWKEMQMMENLKILNLSHSRYLTKTPDFSNLPNLEKLVLKDCPRLSEISHTIGHLHKILMINLKDCISLRNLPRTIYTLKSLKTLILSGCLIVDELEEDLEQMESLTILLADNTAITKVPFSLLRSKTIGYISLCGYNGYSREVFPSIIRSWISPTNNLSSLVQTPAGMSSLVSLDASKSSSHSLSSISDVLTKVQSLLVECGSELQLSRDAILDALSATNSKELESIATTSQESAVKTSTLIECCGQVHISATKKSQKSLLIQMGTNCKAADILKESILQNMNVNAGGGCLLPGDSYPDWLTFNSEGSSVTFIVPQVKGRNLKTMLCLVKSSSPDNITCDGLKNVLVINHTKTTIQLYKREALASFENEEWQRVVSNMEPDDKVEIVAVFWSSFIVMKTTVYLIYDEPISEILKQFHAPDKNVLVGSGDENVCAAKRISPHVEPAEGFKQNQKRRKFD 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02478 578 Gene3D Ribonuclease Inhibitor 47 401 IPR032675 -
Car06g02478 578 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1 525 - -
Car06g02478 578 Coils Coil 212 232 - -
Car06g02478 578 SUPERFAMILY L domain-like 49 321 - -
Car06g02478 578 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 525 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02478 Car-Chr6 27929278 27943372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02478 2 242 WRKY Transcription Factor Family AT4G12020 33.852 2.00e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02478 - - gmx:100800964 760.755