Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02475 ATGATAGTGGCTATGGACTTGAATGCATCTCCAATACCTGAGGAAGACGAAGATGCTTTTGAGGAGAAGATACATGCTCAAGAGTATATTGCTCCTGAAGAACGGATAGAAAGTGGAGCTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAGAGACGTTTGAAAAGAGAACGTTCAGATGAAAGACCTGTGCATCGATCACAGTCACCTCAATATGATCAACCATTTCATAAAAAAAACGTTAAATCATATGATACAAGTAGGCTTCCTCCGGGATGGTTAGATTGCCCTGCGTCTGGCCAGGAGATTTGTTACATGATACCTTCTAAAGTTCCTCTTGGTGAATCATTCAATGACTGCATTTTTCCTGGTAAAAGATACTCATTTAAACAAGTGGTACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTGATTGATTTGACAAATACCACTAGATACTATCCAGTAACAGATTTGAAAAAAGAGGGTATCAAGCATGTTAAGATTCAATGCAGGGGGCGCGATTCTGTACCTGAGAATTCAGCTGTTAATCAGTTTGTCTATGAGGTTATACAATTCTTGTCACGCCAAAAGCAGTCGAAGAAGTATATACTTGTTCATTGTACACATGGGCATAACCGTACGGGATACATGATCGTCCATTATCTAATGCGTTCTATGTCAATGTCGGTTACTCAGGCGATTAAAGCTTTTTCTGAAGCACGCCCTCCAGGAATCTATAAACCGGATTATATTGATGGATTGTATGCATTCTATCATGAAAAAAAGCCCGAGATGGTAGTTTGTCCTCCTACTCCGGAGTGGAAAAGATCTTCTGAACTTGATCTCAATGGTGAAGCAGTTCCAGATGATGATGATGGAATACCAGGTCCTGATTTGCAGGAGAACCATGAGACAGGCACTCAGATGACAAATGATGATGTTTTAGGAGATGAGATACCCGCTGATCAGCAAAATGCATTTCGACAGTTCTGTTATCAAACACTTAGATTGGGTGCTGGGGCCAGAGGACATACAGTGTTTCCAGGTTCACACCCAGTATCTCTCAACAGGGATAATTTGCAGTTATTACGACAACGTTATTATTATGCAACATGGAAGGCTGATGGTACACGATATATGATGCTAATAACATTGGATGGGTGTTACTTGGTTGATAGAAATTTTAACTTTCGAAGGGTCCAAATGAGGTTTCCTTTCAGGAGTACAAATGACGGTTTGGGCGAGAAGAGCCACCACTTCACATTACTTGATGGTGAGATGGTTATTGATACCCTGCCAGATTCACAGAAGCAGGAGAGAAGATACCTTATATATGACATGATGGCAATCAACCACGTTTCAATAATAGAGCGACCCTTCTGTGAGAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATAATGAACGGCAACATATATACCAGAGCAGAAATCCTTACTATAGATATGATCTTGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTTTCTACTGTCACAAAGCTTTTAAAGGAATTCATTAAAAGACTCTCACATGAGGCAGATGGTCTCATATTTCAGGGTTGGGACGATCCTTATGTACCACGTACTCATGAAGGACTCTTAAAGTGGAAATACGCTTATTTAAATTCAGTTGACTTTCTCTTTGAGATTGAAGGTGATCGGGAGCTACTTTTCCTCTACGAGCGGGGAAAGAAGAAACTCTTGGATGGGAGTAGGGTTACTTTCAAAGATGATGTAGATCCTTCACATTATTCTGGAAAGATCATCGAGTGTTCTTGGGATTTTGATAAGCTGGAATGGATATTCATGCGGATTAGGACAGATAAATCATCTCCAAATGAGTTTAATACCTACAGAAAGGTGATGCGAAGCATAAAAGACAACATCACAGAGGAAGACCTGTTGAATGAAATAAATGAGATAATTTGCCTTCCCATGTACGCGGACAGGATAAAAACCGATAGCAAAGCAAATCAGCATACTAATGCCGCAAAGCAGCATACTAATGCCGCAAAGCGAAGGTGA 2070 0.4068 MIVAMDLNASPIPEEDEDAFEEKIHAQEYIAPEERIESGADIARREREERKRRLKRERSDERPVHRSQSPQYDQPFHKKNVKSYDTSRLPPGWLDCPASGQEICYMIPSKVPLGESFNDCIFPGKRYSFKQVVHQQRVLGRKLGLVIDLTNTTRYYPVTDLKKEGIKHVKIQCRGRDSVPENSAVNQFVYEVIQFLSRQKQSKKYILVHCTHGHNRTGYMIVHYLMRSMSMSVTQAIKAFSEARPPGIYKPDYIDGLYAFYHEKKPEMVVCPPTPEWKRSSELDLNGEAVPDDDDGIPGPDLQENHETGTQMTNDDVLGDEIPADQQNAFRQFCYQTLRLGAGARGHTVFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITLDGCYLVDRNFNFRRVQMRFPFRSTNDGLGEKSHHFTLLDGEMVIDTLPDSQKQERRYLIYDMMAINHVSIIERPFCERWKMLEKEVIEPRNNERQHIYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIKRLSHEADGLIFQGWDDPYVPRTHEGLLKWKYAYLNSVDFLFEIEGDRELLFLYERGKKKLLDGSRVTFKDDVDPSHYSGKIIECSWDFDKLEWIFMRIRTDKSSPNEFNTYRKVMRSIKDNITEEDLLNEINEIICLPMYADRIKTDSKANQHTNAAKQHTNAAKRR 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02475 689 Pfam mRNA capping enzyme, C-terminal domain 557 650 IPR013846 -
Car06g02475 689 MobiDBLite consensus disorder prediction 30 67 - -
Car06g02475 689 Coils Coil 40 60 - -
Car06g02475 689 CDD RNA_5'-triphosphatase 92 258 - -
Car06g02475 689 SMART dsp_5 112 263 IPR020422 GO:0006470|GO:0008138
Car06g02475 689 Pfam Dual specificity phosphatase, catalytic domain 141 261 IPR000340 GO:0008138|GO:0016311
Car06g02475 689 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 278 IPR029021 -
Car06g02475 689 PANTHER MRNA-CAPPING ENZYME 3 681 - -
Car06g02475 689 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 316 553 - -
Car06g02475 689 ProSitePatterns Tyrosine specific protein phosphatases active site. 208 218 IPR016130 GO:0016311|GO:0016791
Car06g02475 689 ProSiteProfiles ATP-dependent DNA ligase family profile. 436 580 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Car06g02475 689 MobiDBLite consensus disorder prediction 1 20 - -
Car06g02475 689 MobiDBLite consensus disorder prediction 30 84 - -
Car06g02475 689 CDD Adenylation_mRNA_capping 345 553 IPR001339 GO:0004484|GO:0005524|GO:0006370
Car06g02475 689 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 186 255 IPR000387 GO:0016311|GO:0016791
Car06g02475 689 Gene3D DNA ligase/mRNA capping enzyme 313 552 - -
Car06g02475 689 Pfam mRNA capping enzyme, catalytic domain 354 552 IPR001339 GO:0004484|GO:0005524|GO:0006370
Car06g02475 689 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 681 - -
Car06g02475 689 MobiDBLite consensus disorder prediction 290 311 - -
Car06g02475 689 PIRSF mRNA_capping_HCE 76 689 IPR017074 GO:0004484|GO:0006370|GO:0140818
Car06g02475 689 Gene3D Protein tyrosine phosphatase superfamily 63 284 IPR029021 -
Car06g02475 689 SUPERFAMILY Nucleic acid-binding proteins 556 667 IPR012340 -
Car06g02475 689 Gene3D - 588 657 IPR012340 -
Car06g02475 689 ProSiteProfiles Dual specificity protein phosphatase domain profile. 111 267 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02475 Car-Chr6 27864708 27879471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02475 1 672 Protein tyrosine phosphatase (PTP) family AT3G09100 68.630 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02475 K13917 - gmx:100776633 1217.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02475 06 27864708 27879471 Car06g02475 06 27864708 27879471 ECH