Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02458 atgagaattgttgcttTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCAGTCTTGGGTTGCTGTTGCTTTCTATATAGAAAGGAAAGAAAGAATCAACATGATATCCTCAAAGAAAGCTTTGGGAATGACATTACCTCTTTGGAGTCCTTGCAATTTGAATTAGCCACAATTGAAGCTGCAACAAACAGATTTGGTGTAGAAAACAGGATAGGGAAAGGTGGATTTGGAGAAGTCTACAAAGGAATTCTCTCAGATGGACAAGAAATTGCTGTGAAGAGGCTTACAAGAAGCTCCGGGCAAGGTGCAGAAGAGTTTAAAAATGAGGTTCAAGTTATAGCTAAGCTTCAACACAGAAATCTAAGGCATGTCTGGGTAACAATTGCAACAATTGCATTCTACCTCAACAGCCCTTCAATCAACCTGCCACCACCTCTTGAACCGCCATATTTTAGGCGTAGTAGAATTGAAGAAAACACAACCCTCAGCAAGGAATTGGGCAATACCAGTGATTCCACCAATGGAATCACTATAACTACATTCTTTCCTCGTTAA 657 0.4094 MRIVAFLGCCCFQSWVAVAFSLGLLLLSVLGCCCFQSWVAVAFSLGLLLLSVLGCCCFLYRKERKNQHDILKESFGNDITSLESLQFELATIEAATNRFGVENRIGKGGFGEVYKGILSDGQEIAVKRLTRSSGQGAEEFKNEVQVIAKLQHRNLRHVWVTIATIAFYLNSPSINLPPPLEPPYFRRSRIEENTTLSKELGNTSDSTNGITITTFFPR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02458 218 SUPERFAMILY Protein kinase-like (PK-like) 77 155 IPR011009 -
Car06g02458 218 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 161 218 - -
Car06g02458 218 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 45 156 - -
Car06g02458 218 ProSiteProfiles Protein kinase domain profile. 99 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02458 218 Gene3D Phosphorylase Kinase; domain 1 59 160 - -
Car06g02458 218 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Car06g02458 218 Pfam Protein kinase domain 101 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02458 218 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 45 156 - -
Car06g02458 218 MobiDBLite consensus disorder prediction 195 218 - -
Car06g02458 218 ProSitePatterns Protein kinases ATP-binding region signature. 105 127 IPR017441 GO:0005524
Car06g02458 218 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 161 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02458 Car-Chr6 27475165 27476271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02458 39 155 Receptor kinase-like Gene Family AT4G05200 54.237 8.71e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car06g02458 Pkinase 1.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02458 - - mtr:MTR_1g105585 175.252