Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02454 ATGGAAAACGAAGATTTTAGCACAAACCCATTTCACCTTTTGATCTCTTTTCCATCTACAAACATTGAAACAAGGAAGAAATGGAAGAAAAATCAAAAGGGTAGTTTCAAAATCTTAGCTTTTTTACTTTTTCTAGCTTCAACTATTCAACCTGTTTTAGGACATTTATGGGATGGTGTTGTTGTAACACAATCTGATTTTCAATCTCTAAGGGCTATTAAAAATGAACTCATTGATTCCAAAGGTTTCTTGAGAAGCTGGAATGATTCTGGTTTAGGTGCTTGTTCAGGTGGTTGGGTTGGTATCAAATGTTTGAAAGGTGAAGTTGTTGCAATTCAACTTCCTTGGAAAAGTTTAGGTGGAAGAATCTCTGAGAAAATTGGTCAACTTCAATCTCTTAGAAAACTAAGTCTTCATGATAATTTTCTTGTTGGTTCAATCCCTTTTTCTCTTGGTTTTCTTCCTAATCTAAGAGGTGTTTATCTTTTCAATAACAAACTTTCAGGTTCTATTCCTCTTTCTATTGCTAATTGTCCAATGCTTCAATCTTTTGATGTTAGTAATAATTCTCTTGTTGGTAAAATTCCATCTAGTTTAGCAAATTCAACTAGGATTTTTAGGATTAATTTGAGTTATAACTCACTTTCTGGTTCTATTCCTAGCTTATTCACTATGTCTCAAACTTTAACTATTCTTTCTTTGAGTCATAACAAAATTGTAGGGTCTATTCCAAGTGAAATAGGTAAACTTTCAAGGCTTAGAATTCTTGATCTTTCAAACAATGCAATCAATGGTAGTTTTCCTCTTAGTTTCTCTAATCTCTCTTCTCTTGTTTCATTAAATCTTGAAAACAATCAAATTGAAAACCATGTGCCAAATACTTTAGAAAATTTACATAACCTTTCTGTGTTTAATTTGAAGAACAATAAATTTGATGGCAAAATTCCATCAACAATTGGGAATCTTTCAAGCATTAGTCAAATTGATTTATCTCAGAACAAATTTGTTGGTGAAATTCCTGATTCTTTTACTAAACTAGCAAACCTAAGTTCATTCAATGTCTCATACAACAATCTATCTGGTCCTGTTCCATCACTACTTTCAAAAAAATTCAATGCTAGTTCATTTTTTGGTAACATTGATCTATGTGGTTACATAAGTTCAAAACCATGTCCTTCAACACCACCACCTCATAATCATCCACTACAAGAATCTCCTTCTCCAAACCAACATCACAGGAAACTAAGCACAAAAGACATAATCCTCATTGTAGCAGGTGTTCTACTATtgattttgctattactttgctgctttttgctttgtTGTTTAATCAGGAAAAGAGCTGCTTCAAGTAGAAACAGTAGCAAAGCTGCTAAAGCTGCTGCAAATGCTAGGAATGTTGAAAAAGGTGTTACAAGTGGTGATGTTGTGTCAGGAGGTGAAGCTGGTGGGAAGCTAGTTCACTTTGATGGTCCATTTGTTTTCACTGCTGATGATCTTTTATGTGCTACTGCTGAGATTATGGGAAAAAGTGCTTATGGAACAGCTTATAAGGCAACATTGGAAGATGGTAATCAAGTTGCTGTGAAGAGGTTGAGAGAGAAGACTACTAAAGGACATAAGGAGTTTGAAGCTGAAGTTGCTTCACTTGGGAAAATTAGACATCCAAATCTTTTAGCTCTTAGAGCTTACTATCTTGGACCTAAAGGAGAAAAGCTTCTTGTCTTTGATTACATGAGTAGAGGAAGCCTAGCATCATTTCTTCATGCTCGAGGGCCGGAAATCGTCATAGAATGGCCAACAAGAATGAAAATAGCAATTGGAATCACAAATGGTCTAAGTTGTCTTCACAACCAAGAAAACATAGTACATGGAAACCTCACCTCAAGCAACATACTGTTAAATGAGCAAACAATTCCTCATATAACAGATTTTGGTCTCTCAAGACTAATGACAACCTCAGCCAACACAAACATCATTGCAACAGCAGGAAGTCTTGGATACAATGCACCTGAGCTTTCAAAGACAAAGAAACCAACATCAAAAACTGATGTTTACAGCCTTGGTGTGATCCTTTTGGAGCTTTTGACAGGTAAACCGCCCGGCGAACCGACTAATGGCATGGATTTGCCTCAATGGGTTGCTTCTATTGTGAAAGAGGAATGGACTAATGAAGTGTTTGATTTGGAACTTATGAGGGATGCACCAAGTATTGGTGATGAACTTCTTAATACATTGAAATTGGCTTTACATTGTGTTGATCCTTCACCAGCTGCTAGACCTGATGTTAAACAAGTTTTGCAACAATTGGAGGAGATTAAGCCTGAATTGGTtgaaggtgataataatgataatgatgatgatgatgatgGAGCTAAGGTTCAAATAAATGAATAA 2397 0.3458 MENEDFSTNPFHLLISFPSTNIETRKKWKKNQKGSFKILAFLLFLASTIQPVLGHLWDGVVVTQSDFQSLRAIKNELIDSKGFLRSWNDSGLGACSGGWVGIKCLKGEVVAIQLPWKSLGGRISEKIGQLQSLRKLSLHDNFLVGSIPFSLGFLPNLRGVYLFNNKLSGSIPLSIANCPMLQSFDVSNNSLVGKIPSSLANSTRIFRINLSYNSLSGSIPSLFTMSQTLTILSLSHNKIVGSIPSEIGKLSRLRILDLSNNAINGSFPLSFSNLSSLVSLNLENNQIENHVPNTLENLHNLSVFNLKNNKFDGKIPSTIGNLSSISQIDLSQNKFVGEIPDSFTKLANLSSFNVSYNNLSGPVPSLLSKKFNASSFFGNIDLCGYISSKPCPSTPPPHNHPLQESPSPNQHHRKLSTKDIILIVAGVLLLILLLLCCFLLCCLIRKRAASSRNSSKAAKAAANARNVEKGVTSGDVVSGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGHKEFEAEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDYMSRGSLASFLHARGPEIVIEWPTRMKIAIGITNGLSCLHNQENIVHGNLTSSNILLNEQTIPHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPTSKTDVYSLGVILLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPSIGDELLNTLKLALHCVDPSPAARPDVKQVLQQLEEIKPELVEGDNNDNDDDDDGAKVQINE 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02454 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 228 786 - -
Car06g02454 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 27 243 - -
Car06g02454 798 Gene3D Ribonuclease Inhibitor 112 394 IPR032675 -
Car06g02454 798 Pfam Protein tyrosine and serine/threonine kinase 506 770 IPR001245 GO:0004672|GO:0006468
Car06g02454 798 Pfam Leucine rich repeat N-terminal domain 65 104 IPR013210 -
Car06g02454 798 ProSiteProfiles Protein kinase domain profile. 502 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02454 798 Gene3D Transferase(Phosphotransferase) domain 1 580 796 - -
Car06g02454 798 SUPERFAMILY L domain-like 64 364 - -
Car06g02454 798 CDD STKc_IRAK 508 773 - -
Car06g02454 798 SUPERFAMILY Protein kinase-like (PK-like) 506 774 IPR011009 -
Car06g02454 798 Pfam Leucine rich repeat 228 287 IPR001611 GO:0005515
Car06g02454 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 228 786 - -
Car06g02454 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 27 243 - -
Car06g02454 798 SMART LRR_typ_2 250 273 IPR003591 -
Car06g02454 798 SMART LRR_typ_2 130 151 IPR003591 -
Car06g02454 798 SMART LRR_typ_2 346 369 IPR003591 -
Car06g02454 798 SMART LRR_typ_2 274 297 IPR003591 -
Car06g02454 798 SMART LRR_typ_2 298 322 IPR003591 -
Car06g02454 798 SMART LRR_typ_2 154 178 IPR003591 -
Car06g02454 798 Gene3D Phosphorylase Kinase; domain 1 508 579 - -
Car06g02454 798 MobiDBLite consensus disorder prediction 770 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02454 Car-Chr6 27332466 27335373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02454 55 775 Receptor kinase-like Gene Family AT3G51740 64.774 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car06g02454 PK_Tyr_Ser-Thr 2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02454 - - aip:107625805 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02454 06 27332466 27335373 Car06g02454 06 27332466 27335373 ECH