Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02441 ATGGGAAGTTGTATTAGCTGTGATGCTTCAATTGTAGACAAGGTGCATGATGTTGGATTTGATGAATGTAACAAAAATAATGATATTATTAAATGTGAACATGGTGGGGACCAAATTATGTTGAGAGGTTCCTCTAACTTTGTATCAATGTACTGCCAAAAGGGTACAAAAGGACTTCATAATCAAGATGCAATGACAGTTTGGAAGGACTTTGCTGGAGATAAAGACACAATCTTTTGTGGTGTGTTCGATGGTCATGGTCCTTTAGGACACAAATTTTCATATTCTATCCGTGACAAATTACCCTCCAAACTCTCTACAATAATCAAACTATCACAACAAAAACTCTCCAAACAAAATGGCCCTAATGCTAAAGAAAAAAGTAGTTATGGTGATTTGTATAGTAATGATGATGAGATTAACCAACAATTGTCCATTGCTTCATGGGAAGGAAGTTTTCTTAGATCCTTCAATGAGATGGATAAATATCTTGCTAAAAATGTTGACACCGATGGCTTTTGTGGCGGTAGCGTTGCCGTGACTTTAATTAAAAAGGGCGACCAATTGATAATTGGTAATTTGGGAGATTCTCGTGCAGTTCTTTGCACAAAAGCAGATGACAATCATCTTATTCCTATTCAACTTTCTGTTGACTTGATTCCAGATGTTCCAAGTGAAGCTAAGAGAGTCATTAAGTGTGGAGGTAGAGTTTTTGCTACAAAGCAAGATCCTACTGTAAATAGAATTTGGATGCCTGAAGGTGATTGCCCTGGATTAGCTATGACAAGAGCTTTTGGAGATTTTTGCCTAAAAGACTATGGCCTCTCCTCAATTCCTGATGTATCTTACAGAAAACTTACCAAACAAGATGAATTTGTTGTTTTGGCCACTGATGGGATATGGAATGTGCTAACAAACATGGAAGTAATAACCATAGTTGCTTCAGCACCAAAGAGGTCCTTAGCAGCCAAATTGTTAGTAAAACGTGCTGTTCAAGTTTGGAAACAAAAGTATCCTCGTCACCATATTGATGATTGTGCAGCCATATGCTTGTTCTTTAATGAAAATGCGAGAGGGAATAAAAGATACCCCTAG 1095 0.3735 MGSCISCDASIVDKVHDVGFDECNKNNDIIKCEHGGDQIMLRGSSNFVSMYCQKGTKGLHNQDAMTVWKDFAGDKDTIFCGVFDGHGPLGHKFSYSIRDKLPSKLSTIIKLSQQKLSKQNGPNAKEKSSYGDLYSNDDEINQQLSIASWEGSFLRSFNEMDKYLAKNVDTDGFCGGSVAVTLIKKGDQLIIGNLGDSRAVLCTKADDNHLIPIQLSVDLIPDVPSEAKRVIKCGGRVFATKQDPTVNRIWMPEGDCPGLAMTRAFGDFCLKDYGLSSIPDVSYRKLTKQDEFVVLATDGIWNVLTNMEVITIVASAPKRSLAAKLLVKRAVQVWKQKYPRHHIDDCAAICLFFNENARGNKRYP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02441 364 SMART PP2C_SIG_2 45 353 IPR001932 -
Car06g02441 364 Pfam Protein phosphatase 2C 73 331 IPR001932 -
Car06g02441 364 SMART PP2C_4 38 351 IPR001932 -
Car06g02441 364 PANTHER ALPHABET, ISOFORM E-RELATED 1 357 - -
Car06g02441 364 Gene3D - 41 356 IPR036457 -
Car06g02441 364 CDD PP2Cc 47 353 IPR001932 -
Car06g02441 364 ProSiteProfiles PPM-type phosphatase domain profile. 47 353 IPR001932 -
Car06g02441 364 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 357 - -
Car06g02441 364 SUPERFAMILY PP2C-like 46 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02441 Car-Chr6 27043047 27045502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02441 43 359 PP2C-type Phosphatase Gene Family AT1G16220 47.077 2.38e-109 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02441 - - cam:101501265 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02441 06 27043047 27045502 Car06g02441 06 27043047 27045502 ECH
Car03g01344 03 58422977 58426271 Car06g02441 06 27043047 27045502 PCT