Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02437 ATGTCTTTCAGTTTCAACAACCACTTTTCCAACAATAACAATAATAATACCACCTTAGATATTGCTAAACTTGCAACCTCTTCTGGTCAATTCAAAAGTGATTATGATGATGATCATTTTGGATTTGATGAAGTAGTTTACTCTTCTTATTCTGATTTTCCACCTGGTTTCAGCCCACCAGAGTTACTCAATTCACCTTTCTTTCTTTCTTCTCCTAATTCTAACATTCCTTCATCTTATACAACTGAACCTTCTTCTGGCCAAAGCATCAACAACAAGAGAAACATTGGAACTGAGGACCAACAACATAGTACGAAATTAGATGAGACAGAATTGTCTGACCTCTCTTTCCAAAACCAAAAACAGAACGTGCATGATCTCTTCCAATCTTCCACAACCATGTTTCAAGTGGAGCCTCTAAAGAAACAAGACACATTGATATTCAATGAAACTACAAACCAAACCAATTTTCCTCTTGAAAGGACAACAAAACATGAAGCACAAAATAATTATTCAGCTCATAATGCTTCTATGTCTATTAAAGAACAAAGAAGATCAGAAGAAGATGGATACAAGTGGAGAAAATATGGAGAAAAACAAGTGAAAGGGAGTGAAAATCCAAGAAGCTATTACAAGTGCACTCATTTTAGTTGCTTGATGAAGAAGAAAGTTGAAAGGTCTTTGGAAGGACATGTTACTGAAATAGTATATAAAGGAAGTCATAACCATCATAAGCCTCAATCTAACAAAAGAAAAACAAATTCATCATGCACCAATTCAATGATTTCTGATCTTTCTTTGGGAGAGGATAATGAGTTTGAGCAAACTTCACAAACTAGTTATTCTGGTCGAGATTATGATGATTTGGGACTAGAGGCCAAAAGATGGAAAGGAGAGACTGAAAATGATAGCAATTCATATTCCACAGCTGGGACTAGAACTGTTAAGGAACCTAGAGTTGTTGTTCAAACTACAAGTGAAATTGATATACTTGATGATGGATATAGATGGAGGAAATATGGACAAAAAGTAGTTAAAGGAAATCCAAATCCAAGGAGTTACTACAAATGTGTAATTCAAGGTTGTCCTGTTAGAAAACATGTTGAGAGAGCTGCACATGATATGAAAGCAGTAATCACAACATATGAAGGGAAGCATAACCATGATGTACCTATAGGAAGAGGAAGTGCAAGTTGTACCATTAACAAAGCTTCTCTTAACAACAACACATGTAATGTAACTCCTATAAGGCCCTCACCAATGACTAATTATTCTAACTCACAAAATTTCACAAATTTACTTCATGATTCTAAGATACTACCGACTTCGGGAACTCAACAACATTTTCAAATAGACATGGCACGGAGTTCTAGAAGTTTTTTGGATTGGTCAATTGGTTCAAATGTCAGTTCTGAACGGTACTCAGATGATGCATACTCAGTTAAAGATGACTCGCTCGTTCAGTCTTTTCTATCAACGAACATCTAA 1488 0.3548 MSFSFNNHFSNNNNNNTTLDIAKLATSSGQFKSDYDDDHFGFDEVVYSSYSDFPPGFSPPELLNSPFFLSSPNSNIPSSYTTEPSSGQSINNKRNIGTEDQQHSTKLDETELSDLSFQNQKQNVHDLFQSSTTMFQVEPLKKQDTLIFNETTNQTNFPLERTTKHEAQNNYSAHNASMSIKEQRRSEEDGYKWRKYGEKQVKGSENPRSYYKCTHFSCLMKKKVERSLEGHVTEIVYKGSHNHHKPQSNKRKTNSSCTNSMISDLSLGEDNEFEQTSQTSYSGRDYDDLGLEAKRWKGETENDSNSYSTAGTRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVIQGCPVRKHVERAAHDMKAVITTYEGKHNHDVPIGRGSASCTINKASLNNNTCNVTPIRPSPMTNYSNSQNFTNLLHDSKILPTSGTQQHFQIDMARSSRSFLDWSIGSNVSSERYSDDAYSVKDDSLVQSFLSTNI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02437 495 ProSiteProfiles WRKY domain profile. 188 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g02437 495 MobiDBLite consensus disorder prediction 75 98 - -
Car06g02437 495 MobiDBLite consensus disorder prediction 267 284 - -
Car06g02437 495 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 44 493 IPR044810 GO:0003700
Car06g02437 495 MobiDBLite consensus disorder prediction 75 108 - -
Car06g02437 495 Gene3D WRKY domain 316 392 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g02437 495 Gene3D WRKY domain 172 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g02437 495 MobiDBLite consensus disorder prediction 267 286 - -
Car06g02437 495 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 44 493 - -
Car06g02437 495 SMART WRKY_cls 187 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g02437 495 SMART WRKY_cls 331 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g02437 495 SUPERFAMILY WRKY DNA-binding domain 323 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g02437 495 MobiDBLite consensus disorder prediction 237 261 - -
Car06g02437 495 SUPERFAMILY WRKY DNA-binding domain 185 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g02437 495 Pfam WRKY DNA -binding domain 332 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g02437 495 Pfam WRKY DNA -binding domain 188 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g02437 495 ProSiteProfiles WRKY domain profile. 326 391 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02437 Car-Chr6 26966957 26971891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02437 57 426 WRKY Transcription Factor Family AT2G38470 48.049 1.03e-95 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g02437 WRKY 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02437 K13424 - gmx:100127367 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02437 06 26966957 26971891 Car06g02437 06 26966957 26971891 ECH
Car03g01353 03 58542757 58545282 Car06g02437 06 26966957 26971891 PCT