Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02433 ATGAGAAACTCGTTCAAGACTTTTAACAAACACTTTACCTTCCATAAAAATCCTCACTCTTTTGGTTTCGTAATTTCTGCTGCTCCTACTCTCTTACAGCATTCTACTACTCACCCGAGGCTCTGTTCCTCTCATCGTCGGACATATTCCTCATCTCCATCTTCTACGTTAATGGAAGTATTCAAAGCAATTGTTAAACAAGAACTTGCATCCCATGGAAATGTTGCTATCAGAGCTGATCAGAAGAATTATAGTTACACACAACTTATCTTGTCGGCACAGAAGATATCTAATATCTTGTGTGGAAATAATGTCAAAGGAAATCTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAATTTGTTGCTGGAATACTTGGGACTTGGCTTAGTGGTGGTGTTGCTGTTCCACTTGCAGTCAGCTATCCAGAAGTAGAGCTCTTACATGTTATTAATAATTCGGACACATCTGCAATACTGAGTACTGAAGATCATAGTGAACTAATGCAACACATCGCCAATAAAACATCTTCTCAGTTTTTTCATCTTCCACCTGTTGCTAATAAATCTTTAGAGAAGAGCAGAGATGAACATTCACAGAATGGGAAAATTGATGCAGATGGAGTTTTCCTGGAGAATATAGAAAGATCAAGTGAAGATCCGGCACTAATTTTGTATACTAGTGGAACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCATTTCTCAGGTCCAGTCCTTGACAGAAGCGTGGGAGTACACATCTGCTGATCAGTTTTTGCATTGCCTACCTCTGCATCATATCCTTGAAAGATTTTTTGCATGTTCCACGGTTGAGTTTTTGCCAAAATTTAGTGTCAGGGGAGTTTGGCAGAGATGGCGTGAGTCATATCCAACTGAAGAATCTAAGGCTGAGGATGCTATAACTGTATTCACTGGAGTTCCAACTATATATGCCCGACTATTACAAGGTTATCGTGCGATGGATCCTGAGCTACAAGCCGCATCAGCATCTGCTGCAAGGAACTTGCGTTTAATGATGTGTGGCTCCGCAGCACTTCCTCAACCTGTTATGATAGAATGGGAAGCCGTCACTGGGCATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCATTGAAAGGTGAGCGTAAGGCAGGCACAGTTGGTAAACCATTGCCTGGTGTGCAGGTTAAGATTCTTGAAGATGAGGAGGGTGGGAGTGAAAAAACTGGAGCCGGTGGTGAGCTTTGCGTTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCAGAGGTAACAAAGGAATCATTTACAGAAGATGGATTCTTTAAGACCGGAGATGCAGTTACAACAGATAAAGATGGATATTACATCATTCTAGGACGTACTAATGCGGATATAATCAAGGCTGGTGGCTATAAGCTGTCTGCATTAGAAATCGAATCAGTTATAATAGAGGCAAGTGGCTATCGTTTTCTCATCCTATGGTTGTTAATTCATCCATCTGTCTCAGAATGTTGTGTGTTGGGCTTACCAGACAAAGACTATGGAGAAATTGTTGGTGCGATTGTTGTGCCAGAGGCTGATGTTAAACGAAAGAGAGATGAAGAGTCAAAGCCTGCTCTAAGCCTAGAAGAATTATCCACATGGGCCAAAGATAAAATTGCACCTTACAAGATACCAACTCGACTAATCCTGTGGGACTCACTCCCCCGCAATGCAATGGGGAAGGTAAGTAAAAAAGAGCTGAAGAAGATGCTAGCTTCAGAATAG 1818 0.4158 MRNSFKTFNKHFTFHKNPHSFGFVISAAPTLLQHSTTHPRLCSSHRRTYSSSPSSTLMEVFKAIVKQELASHGNVAIRADQKNYSYTQLILSAQKISNILCGNNVKGNLGGARIGIVAKPSAEFVAGILGTWLSGGVAVPLAVSYPEVELLHVINNSDTSAILSTEDHSELMQHIANKTSSQFFHLPPVANKSLEKSRDEHSQNGKIDADGVFLENIERSSEDPALILYTSGTTGKPKGVVHTHRSIISQVQSLTEAWEYTSADQFLHCLPLHHILERFFACSTVEFLPKFSVRGVWQRWRESYPTEESKAEDAITVFTGVPTIYARLLQGYRAMDPELQAASASAARNLRLMMCGSAALPQPVMIEWEAVTGHRLLERYGMTEFVMALSNPLKGERKAGTVGKPLPGVQVKILEDEEGGSEKTGAGGELCVKSPSLFKEYWKLPEVTKESFTEDGFFKTGDAVTTDKDGYYIILGRTNADIIKAGGYKLSALEIESVIIEASGYRFLILWLLIHPSVSECCVLGLPDKDYGEIVGAIVVPEADVKRKRDEESKPALSLEELSTWAKDKIAPYKIPTRLILWDSLPRNAMGKVSKKELKKMLASE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02433 605 Gene3D - 60 477 IPR042099 -
Car06g02433 605 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Car06g02433 605 SUPERFAMILY Acetyl-CoA synthetase-like 44 604 - -
Car06g02433 605 PANTHER MALONATE--COA LIGASE-LIKE 4 604 - -
Car06g02433 605 Gene3D - 480 605 IPR045851 -
Car06g02433 605 PANTHER ACYL-COA SYNTHETASE 4 604 - -
Car06g02433 605 Pfam AMP-binding enzyme 73 483 IPR000873 -
Car06g02433 605 CDD MCS 75 600 - -
Car06g02433 605 Pfam AMP-binding enzyme C-terminal domain 514 592 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02433 Car-Chr6 26862974 26876852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02433 222 604 Monolignol Biosynthesis Gene Families AT4G19010 27.930 2.10e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02433 K18660 - gmx:100813324 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02433 06 26862974 26876852 Car06g02433 06 26862974 26876852 ECH