Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02425 ATGCAGGGTAAGGGAACAGGTAGTTTCGGTAAGAGAAGGAACAAGACCCACACACTCTGTATTAGGTGTGGCCGTCGCAGTTTCCATCTCCAGAAAAGTCGCTGCTCAGCATGTGCTTACCCAGCTGCACGTGTCAGGAAATATAACTGGAGTGTTAAGGCTATTAGGAGAAAGACTACTGGAACTGGTAGGATGAGGTATTTGCGTCATGTGCCTCGCAGATTCAAAAGTGGATTCAGAGAAGGGACCGAAGCTGCACCCAGGAAGAAGGGAGCAGCTGCCTCTGCATAA 291 0.4948 MQGKGTGSFGKRRNKTHTLCIRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKKGAAASA 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02425 96 Gene3D - 2 88 IPR011331 GO:0003735|GO:0005840|GO:0006412
Car06g02425 96 PANTHER 60S RIBOSOMAL PROTEIN L37 3 95 - -
Car06g02425 96 PANTHER RIBOSOMAL PROTEIN L37 3 95 - -
Car06g02425 96 SUPERFAMILY Zn-binding ribosomal proteins 3 56 IPR011332 GO:0006412
Car06g02425 96 Pfam Ribosomal protein L37e 4 54 IPR001569 GO:0003735|GO:0005840|GO:0006412
Car06g02425 96 ProSitePatterns Ribosomal protein L37e signature. 5 24 IPR018267 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02425 Car-Chr6 26776902 26778130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02425 4 96 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 88.172 3.29e-57 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02425 K02922 - cit:102617479 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02425 06 26776902 26778130 Car06g02425 06 26776902 26778130 ECH