Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02422 ATGGCACCATTGATGATATTACCAAAGACAAGTCTTGTGATTCTTGTGTTATGTCTTTTACTCTCTTTTGATcaaaacaaacaaaccaaatacaacaacaaCGATACATTCATCAACACCATTCCTTTACATTCATTTTCCAATGGCCATGTTTCTTTATCTGTTATAAAAAACAACAACACTTTTTCTTCTTCTCAATCTTCTTTGCTTGAATATGATTTCTACCGGAATTCTTGTCCTCGTGTCGAACGCATTGTTCGTTCGACAATTCATCGTCTTCATCGAAATGCTCCTTCTTTGGTTCCTGCTCTTATTCGTCTTTTTTTTCATGATTGCTTCATTCAGggatgtgatgcttctgttttgttagatgatgatgattacattaattcagaaaaagactcacctccaaatgaaagtctcaaaggatttgatgtaatagaagccattaaatcccagcttgaagaagcatgccctggtgttgtttcttgtgctgatattcttgttctggctgcaagagaatctgttgttctgGCTGGTGGTCCATTTTATCCTTTATATACAGGCAGGAGAGATGGTTCTAACTCTTTTGCTGACATTGCAACATATGAGCTTCCTTCACCTTATGCTGATTTATCTCAAACCCTTGCATCCTTCAAGTCAAGGGGATTTGATGAAAGAGAAATGGTCACTCTCTTAGGTGCCCACAACATTGGTGTAATACACTGCGAATTCTTCGTAAACCGTCTCTATAACTTCAGTGGAACTAATGAACCTGACCCTTCTTTAGATACTGAATTTCTAAATGTACTAAGATCAAGATGCAATAACACTGATGGCTCCCCTTCTTCCTTAGTTGAAGTGCAACAAGAAATCGGTATGGACTCCAAACAATCTCTATCAAAATTCGGGACATCATACTACCACGGCCTATTGCAAGGCAAAGGAATCCTCTATGCTGATCAGCAGTTAATGGAAGGGGAAAAAACAAAGTATTGGGTTCAACAATATGCATCTAATCCTACTTTGTTCCATCAACATTTCGCCATAGCAATGATGAAACTCTCCGATCATCGAGTTTTGACAATGCCTATGGGACAGATTCGGCGCAGTTGTTCAAAGGTTGCATGA 1131 0.3148 MAPLMILPKTSLVILVLCLLLSFDQNKQTKYNNNDTFINTIPLHSFSNGHVSLSVIKNNNTFSSSQSSLLEYDFYRNSCPRVERIVRSTIHRLHRNAPSLVPALIRLFFHDCFIQGCDASVLLDDDDYINSEKDSPPNESLKGFDVIEAIKSQLEEACPGVVSCADILVLAARESVVLAGGPFYPLYTGRRDGSNSFADIATYELPSPYADLSQTLASFKSRGFDEREMVTLLGAHNIGVIHCEFFVNRLYNFSGTNEPDPSLDTEFLNVLRSRCNNTDGSPSSLVEVQQEIGMDSKQSLSKFGTSYYHGLLQGKGILYADQQLMEGEKTKYWVQQYASNPTLFHQHFAIAMMKLSDHRVLTMPMGQIRRSCSKVA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02422 376 CDD secretory_peroxidase 70 375 IPR033905 GO:0004601|GO:0042744
Car06g02422 376 Pfam Peroxidase 86 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PANTHER PEROXIDASE 300 374 - -
Car06g02422 376 PANTHER PEROXIDASE 63 285 - -
Car06g02422 376 Gene3D Peroxidase, domain 2 206 355 - -
Car06g02422 376 ProSitePatterns Peroxidases active site signature. 101 112 IPR019794 GO:0004601
Car06g02422 376 PANTHER PEROXIDASE 25-RELATED 63 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PANTHER PEROXIDASE 25-RELATED 300 374 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 SUPERFAMILY Heme-dependent peroxidases 70 375 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Haem peroxidase superfamily signature 101 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Haem peroxidase superfamily signature 162 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Haem peroxidase superfamily signature 180 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Haem peroxidase superfamily signature 296 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 ProSiteProfiles Plant heme peroxidase family profile. 69 376 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 Gene3D - 73 375 - -
Car06g02422 376 PRINTS Plant peroxidase signature 79 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Plant peroxidase signature 103 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Plant peroxidase signature 142 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Plant peroxidase signature 161 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Plant peroxidase signature 180 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Plant peroxidase signature 227 239 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Plant peroxidase signature 310 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02422 376 PRINTS Plant peroxidase signature 350 363 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02422 Car-Chr6 26756290 26759495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02422 68 375 Peroxidase AT4G33870 51.642 1.42e-120 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02422 K00430 - twl:119991033 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02422 06 26756290 26759495 Car06g02422 06 26756290 26759495 ECH