Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02420 ATGGATTTCTGGCCAGAGTTTCTTGCAAGTAGTTCAGGTAGAGAGTTTGTGGCTGGTGGATTTGGAGGAACTGCTGGTGTAATTTCTGGTTATCCTTTGGATACTCTTCGAATTCGACTACAAAGTTCGAAAAATGGTTCTGCTTTTAGTATCCTTAAAAATATGGTTTCTAAGGAAGGACCAGCTTCTTTGTACCGTGGCATGGCTGCACCATTGGCATCAGTTACTTTTCAGAATGCTATAGTTTTTCAGACATATGCAGTTCTCTCAAGGGCATTTGACCCATCTGATTCAACCAAAGACCCTCCGTCCTACAAGAGTGTTGCTTTAGGTGGAATTGGTACAGGAGCACTTCAAAGTCTATTGCTTTCCCCAGTGGAACTGGTCAAAATTCGACTTCAGCTGCAAAACACAAGCCAGTCAAAAGAATCAGGAACAAGTCCTGTAAAAGTAGCTAAAAACATATGGAGAAAAGAGGGTTTCCGCGGCATGTATCGAGGACTCGGAATCACTGTAATGAGAGATATACCTTCACATGGTTTTTACTTCTGGACGTATGAATACATAAGGGAACAATTGCATCCAGGTTGTAGGAAAAGTGGTCAAGAAAATGTGAATACTATGTTGATTTCTGGAGGATTAGCAGGGGTAGCAAGTTGGGTTTGTAGTTACCCTTTTGATGTTGTGAAGACAAGACTACAAGGTCAAACACCATCTTCTTTAAAATACTTGGGGATTTGCGATTGTATCAGAAAAAGTGTTAAAGAAGAAGGGTACCATGTGTTGTGGCGCGGTTTAGGAACTGCGGTGACAAGAGCATTTGTGGTGAATGGTGCTGTTTTTGCTGCTTATGAGTTTACATTGAGATTTCTGTTGAACAATGAAAACATTAAAATACAGGAAACAATTTAG 912 0.4057 MDFWPEFLASSSGREFVAGGFGGTAGVISGYPLDTLRIRLQSSKNGSAFSILKNMVSKEGPASLYRGMAAPLASVTFQNAIVFQTYAVLSRAFDPSDSTKDPPSYKSVALGGIGTGALQSLLLSPVELVKIRLQLQNTSQSKESGTSPVKVAKNIWRKEGFRGMYRGLGITVMRDIPSHGFYFWTYEYIREQLHPGCRKSGQENVNTMLISGGLAGVASWVCSYPFDVVKTRLQGQTPSSLKYLGICDCIRKSVKEEGYHVLWRGLGTAVTRAFVVNGAVFAAYEFTLRFLLNNENIKIQETI 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02420 303 Gene3D Mitochondrial carrier domain 12 301 IPR023395 -
Car06g02420 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Car06g02420 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Car06g02420 303 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Car06g02420 303 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Car06g02420 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Car06g02420 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Car06g02420 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 292 - -
Car06g02420 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Car06g02420 303 Pfam Mitochondrial carrier protein 12 93 IPR018108 -
Car06g02420 303 Pfam Mitochondrial carrier protein 206 294 IPR018108 -
Car06g02420 303 Pfam Mitochondrial carrier protein 104 193 IPR018108 -
Car06g02420 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Car06g02420 303 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 292 - -
Car06g02420 303 SUPERFAMILY Mitochondrial carrier 14 286 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02420 Car-Chr6 26750251 26752910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02420 1 294 Antiporters AT1G79900 70.508 1.12e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02420 K15109 - gmx:100812056 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02420 06 26750251 26752910 Car06g02420 06 26750251 26752910 ECH