Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02407 ATGCCAAAGAACCTTCAAAAATCCCTTCAAAGTTACCTCTCCAAAATCAAAAGCACTCGTCCATCAAAACTCTATATGCCCTCTAAGAGATGGATTCATCTCAAAATCAAAGGTTGCAAACATCCTAGAACTCCTTCTTTATCCTTTGATGACAAAAACAAGAACAACGACGATGAAGCCACACTAGAGGACATTGATCGCTTTCTCTTCGAAAATTTCAAGTCTTTATACCTCGAAGATCTCGAAGAAACCAATTGTAACAACAAAACCAAAAAGGTCGTCTCATCACaaaaagaagatgatgaagaagaagaagaagaagaaTTTCGTGAAAAAAAACCTAAAAAATCTAGTCGCATATTGTTTGATTCATCCGAGGATGGATCTAACAGATTCTTTTTGAGACGTGGCTTTTCCTGCTCCATGATCGACacaacatcaacaacaacaacaaACACATGTGAAGAAATAGGATCAAGCTCAAACTCATCAACTTCAAAAAGCTTCAACAATGATTCATTTTCGAAGGAGCATCACATGAATCTTCCTAATAATTGTGTTGTTGTGTTGGCAAGTTCGCCGAATCCTTACGATGACTTTCGAAGATCTATGGAAGGAATGATGGATGTTGGGATGAGGAACAATGAAAAGGTGGATTGGGATTTCATGGAAGAGCTTTTATTTTGTCATTTAAACTTAAACGATAAGAAATCATATAAATTTATATTAAATGCTTTTTGTGACTTGGTCGCCGACATGGGGGGGAGTTCGGAGACAAATCCGGCGAAGCCGCGAAGCGTTCGAACCATAAGGACGAGAGGGAGGTGA 828 0.3635 MPKNLQKSLQSYLSKIKSTRPSKLYMPSKRWIHLKIKGCKHPRTPSLSFDDKNKNNDDEATLEDIDRFLFENFKSLYLEDLEETNCNNKTKKVVSSQKEDDEEEEEEEFREKKPKKSSRILFDSSEDGSNRFFLRRGFSCSMIDTTSTTTTNTCEEIGSSSNSSTSKSFNNDSFSKEHHMNLPNNCVVVLASSPNPYDDFRRSMEGMMDVGMRNNEKVDWDFMEELLFCHLNLNDKKSYKFILNAFCDLVADMGGSSETNPAKPRSVRTIRTRGR 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02407 275 MobiDBLite consensus disorder prediction 153 173 - -
Car06g02407 275 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 269 IPR038933 GO:0045892
Car06g02407 275 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 269 - -
Car06g02407 275 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 187 251 IPR006458 -
Car06g02407 275 MobiDBLite consensus disorder prediction 256 275 - -
Car06g02407 275 ProSiteProfiles OVATE domain profile. 189 252 IPR006458 -
Car06g02407 275 Pfam Transcriptional repressor, ovate 193 252 IPR006458 -
Car06g02407 275 MobiDBLite consensus disorder prediction 108 122 - -
Car06g02407 275 MobiDBLite consensus disorder prediction 89 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02407 Car-Chr6 26518796 26519623 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Car06g02407 Ovate 1.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02407 - - mtr:MTR_4g012060 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02407 06 26518796 26519623 Car06g02407 06 26518796 26519623 ECH
Car01g02794 01 53215555 53216814 Car06g02407 06 26518796 26519623 PCT