Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02406 ATGAGCGTGGTGGGTTTTGATTTTGGTAACGAGAGTTGCATTGTTGCGGTTGCTAGGCAGAGAGGTATTGATGTTGTGTTAAACGATGAATCGAAAAGGGAAACACCTGCTATTGTGTGTTTCGGTGAAAAGCAGCGTTTTATTGGTACTGCTGGTGCTGCTTCCACTATGATGAACCCTAAGAATTCAATCTCGCAGATTAAGAGACTTATTGGAAAGCAATTCTCTGACCCCGATGTGCAGGGGGATCTTAAGTCTTTGCCTTTTAGTGTCACTGAAGGACCTGATGGATACCCTTTGATTCATGCTCGTTACTTGGGGGAAGTTAAAACGTTTACGCCTACGCAAGTGTTTGCAATGATGCTGTCGAATCTTAAAGAGATAGCCGAGAAAAATCTCAATACAGGGGTAAATGATTGTTGCATTGGTATCCCGGTTTATTTCACTGATGTTCAGAGAAGGGCTGTCTTGGATGCTGCAACTATTGCTGGTTTGCATCCGCTTCGGTTGATTCATGAAACTACCGCAACTGCATTGGCATATGGAATTTATAAAACGGATTTGCCTGAAAATGATCAGCTGAATGTGGCCTTTGTGGACATTGGACATGCTAGTATGCAGGTGTGCATTGCTGGCTTCAAAAAGGGGCAGCTGAAAGTGTTGGCTCATTCGTTCGATAGGTCTCTTGGTGGTAGGGATTTTGATGAAGTTTTGTTCCATCATTTTGCTGGGAAGTTTAAGGAGGAGTACAAAATTGACGTGCTTCAGAATGCTAGGGCTTGTTTGAGGCTTAGGGCTGCTTGTGAGAAGATGAAGAAGATGCTTAGTGCAAATCCTGTGGTACCCCTAAACATTGAGTGTTTGATGGATGAAAAGGATGTAAAGGGTATCATGAAGCGTGAAGAGTTTGAGGAACTGAGTCTTCCGATTTTGGAGCGAGTCAAAGGACCTTTGGAGAAGGGACTTGCTGAAGCAGGACTCTCAGTTGATGATATACACATGGTTGAGGTCGTTGGTTCGGGCTCTCGTGTACCGGCTATTAACAAAATATTGACTGAGTTTTTCAAGAAGGAGCCTAGGCGGACAATGAATGCCAGTGAATGTGTTGCTAAAGGGTGTGCATTGGAATGTGCTATTCTTAGTCCAACATTTAAAGTGCGAGAATTTCAGGTCAATGAAAGCTTTCCTTTCTCAATTTCTCTTTCGTGGAAAGGATCTGGTCCAGATGCACAGGATAGTGGACCCGATAATAAGCAGAGTTCCCTTGTTTTCCCCAAGGGTAATCCCATTCCTAGTATCAAGGCACTGACTTTCTATAGGTCAGGAACATTTTCCATTGATGTACAATATGGTGATGTGAGTGGGCTGCAAACACCTGCTAGGATCAGCACATATACTATTGGTCCTTTCGAAACCAAACAAAACGAAAAGGCAAAAGTGAAAGTTAAAGCTCGTTTGAATGTGCATGGAATTGTATCTGTTGACTTGGCAACTCTCCTAGAAGAGGAAGAAGTTGAGGTTTCAGTTTCCAAAGAATCAGCAAGAGAAACTACTAAGACGGATGCTGATGAAACTCCTGCTGATGTTGCTGCACCTCCCACCTCCAATGACAATGATGCTGATGTTAATATGCAAGATGCAAAGGCTAATGCTGATAACCCTGGAGTTGAAAATGGCGTCCCTGAGACTGGAGATAAGCCTGTACAGATGGATGTTGATGATACCAAGGCTCCAAAGAAAAAGGTTAAGAAAACAAACGTTCCTATAGCAGAGTTAGTTTATGGAGCAATGGCACCTGTTGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAGGACAAGAAAAATGCCGTTGAGGCCTATGTTTATGACACGAGAAACAAGCTCAATGACAAATACCATGACTTTGTCACTGCTTCGGAGAGGGAAGATCTCACTGCTAAGCTTCAAGAGGTGGAAGATTGGCTATATGAGGAGGGTGAAGATGAAACTAAAGGTGTATACATTGCCAAACTTGAAGAGCTAAAAAAGCAAGGTGACCCTATCGAAGAGCGTTACAAAGAATACACAGAGAGGGGTACAATAATTGAGCAGTTCATCTATTGTATAAGTAGTTACAGAGAAGCTGCAATGTCAGCTGATCCCAAATTTGATCACATTGACATTAACGAGAAACAGAAGGTCTTAAATGAGTGTGTTGAAGCTGAGAACTGGCTTAGGGAGAAGAAGCAGCAGCAGGACTCACTTCCAAAATATGCCAACCCAGTACTCTTGGTAGCTGAAATAAGAAGGAAAGCTGAGGCTGTTGATAGGATATGCAAGCCGATTATGACAAAACCAAGGCCAGCCAAGCCAGCTGCTCCTCAAGCACCACCAACCCCAGCTTCTCCCGGTGCTGAGCAGCAGCAATCTCAGGCAGATGCTAATGTCAGCACTAATGATAATGCCGGCGATGATGGTAGTCAGGCTACTGAACCAATGGAGACTGAAAAGTCAGAGAATGCAGGTTCTGCTTAA 2550 0.4349 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFIGTAGAASTMMNPKNSISQIKRLIGKQFSDPDVQGDLKSLPFSVTEGPDGYPLIHARYLGEVKTFTPTQVFAMMLSNLKEIAEKNLNTGVNDCCIGIPVYFTDVQRRAVLDAATIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFAGKFKEEYKIDVLQNARACLRLRAACEKMKKMLSANPVVPLNIECLMDEKDVKGIMKREEFEELSLPILERVKGPLEKGLAEAGLSVDDIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGCALECAILSPTFKVREFQVNESFPFSISLSWKGSGPDAQDSGPDNKQSSLVFPKGNPIPSIKALTFYRSGTFSIDVQYGDVSGLQTPARISTYTIGPFETKQNEKAKVKVKARLNVHGIVSVDLATLLEEEEVEVSVSKESARETTKTDADETPADVAAPPTSNDNDADVNMQDAKANADNPGVENGVPETGDKPVQMDVDDTKAPKKKVKKTNVPIAELVYGAMAPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDTRNKLNDKYHDFVTASEREDLTAKLQEVEDWLYEEGEDETKGVYIAKLEELKKQGDPIEERYKEYTERGTIIEQFIYCISSYREAAMSADPKFDHIDINEKQKVLNECVEAENWLREKKQQQDSLPKYANPVLLVAEIRRKAEAVDRICKPIMTKPRPAKPAAPQAPPTPASPGAEQQQSQADANVSTNDNAGDDGSQATEPMETEKSENAGSA 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02406 849 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Car06g02406 849 MobiDBLite consensus disorder prediction 784 849 - -
Car06g02406 849 CDD HSPA4_like_NDB 2 381 - -
Car06g02406 849 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Car06g02406 849 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 711 797 IPR029048 -
Car06g02406 849 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 697 IPR029048 -
Car06g02406 849 Gene3D - 708 791 IPR029048 -
Car06g02406 849 MobiDBLite consensus disorder prediction 504 523 - -
Car06g02406 849 MobiDBLite consensus disorder prediction 807 849 - -
Car06g02406 849 Gene3D - 599 707 IPR029048 -
Car06g02406 849 PANTHER HSC70CB, ISOFORM G-RELATED 1 848 - -
Car06g02406 849 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 630 IPR029047 -
Car06g02406 849 MobiDBLite consensus disorder prediction 503 579 - -
Car06g02406 849 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 594 IPR029047 -
Car06g02406 849 Gene3D - 5 374 - -
Car06g02406 849 Gene3D Actin; Chain A, domain 4 230 313 - -
Car06g02406 849 MobiDBLite consensus disorder prediction 406 425 - -
Car06g02406 849 MobiDBLite consensus disorder prediction 792 806 - -
Car06g02406 849 Pfam Hsp70 protein 3 698 IPR013126 GO:0005524|GO:0140662
Car06g02406 849 Gene3D - 186 360 - -
Car06g02406 849 Coils Coil 683 703 - -
Car06g02406 849 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 848 - -
Car06g02406 849 PRINTS 70kDa heat shock protein signature 2 15 - -
Car06g02406 849 PRINTS 70kDa heat shock protein signature 30 42 - -
Car06g02406 849 PRINTS 70kDa heat shock protein signature 140 160 - -
Car06g02406 849 PRINTS 70kDa heat shock protein signature 332 348 - -
Car06g02406 849 PRINTS 70kDa heat shock protein signature 363 383 - -
Car06g02406 849 Gene3D - 38 113 - -
Car06g02406 849 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02406 Car-Chr6 26508300 26513487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02406 4 406 Calmodulin-binding Proteins AT1G16030 36.453 9.38e-85 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02406 K09489 - gmx:100816539 1365.13