Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02405 ATGAGCGTGGTGGGTTTTGATTTTGGTAACGAGAGTTGCATTGTTGCGGTTGCTAGACAGAGAGGTATTGATGTTGTGTTAAACGATGAATCGAAAAGGGAAACACCTGCTATTGTGTGTTTCGGTGAAAAGCAGCGTTTTATTGGTACTGCTGGTGCTGCTTCCACTATGATGAACCCTAAGAATTCAATCTCGCAGATTAAGAGACTTATTGGAAAGCAATTCTCTGATCCCGAAGTGCAGGGTGATCTTAAGTCTTTGCCTTTTAGTGTCACTGAAGGACCTGATGGATACCCTTTGATTCATGCTCGTTACTTGGGGGAAGTTAAAACGTTTACGCCTACTCAAGTGTTTGCGATGATGCTGTCGAATCTTAAAGAGATAGCCCAGAAAAATCTCAATGCGGGGGTTAACGATTGTTGCATTGGGATTCCGGTTTATTTCACTGATGTTCAGAGAAGGGCTGTTTTGGATGCTGCAACTATTGCTGGTTTGCACCCGCTTCGGTTGATTCATGAAACTACTGCGACTGCGTTGGCTTATGGGATTTATAAAACGGATCTTCCTGAAAATGATCAGCTGAATGTGGCCTTTGTTGACATTGGGCATGCTAGTATGCAGGTTTGCATTGCTGGCTTCAAAAAGGGGCAGCTGAAAGTGTTGGCTCATTCGTACGATAGGTCTCTTGGTGGTAGGGATTTTGATGAGGTTTTGTTCCATCATTTTGCTGGGAAGTTTAAGGAGGAGTACAAAATTGACGTGCTTCAGAATGCTAGGGCTTGTTTGAGGCTTAGGGCTGCTTGTGAGAAGATGAAGAAGATGCTTAGTGCAAATCCGGTGGTGCCCCTAAACATTGAGTGCTTGATGGATGAGAAGGACGTAAAGGGTATCATGAAGCGTGAAGAGTTTGAGGAACTGAGTCTTCCAATTTTGGAGCGTGTCAAAGGACCTTTGGAGAATGCACTTGCAGAAGCTGGGCTCTCAGTTGATGATGTACACATGGTTGAGGTCGTTGGTTCTGGCTCTCGTGTACCGGCCATTAACAAAATATTGACTGAGTTTTTCAAGAAGGAGCCTAGGCGGACAATGAACGCCAGTGAATGTGTTGCTAAAGGGTGTGCATTGGAATGTGCTATTCTTAGTCCAACATTCAAAGTGCGAGAATTTCAGGTCAACGATAGCTTTCCTTTCTCAATTTCTCTTTCGTGGAAAGGATCTGGTCCAGATGCACAGGATAGTGGGTCGGATAATAAGCAGAGTTCCCTTGTTTTTCCCAAGGGTAATCCCATTCCCAGTATCAAGGCACTGACTTTCTATAGGTCAGGAACATTTTCCATTGATGTACAATATGGTGATGTGAGTGGGCTGCAAAAACCTTCTAGGATCAGCACGTATACTATTGGTCCTTTTGAAACCAAACAAAACGAAAAGGCAAAGGTGAAAGTTAAAGCTCGTTTGAATGTGCATGGAATTGTATCTGTTGACTTGGCAACTCTCCTGGAAGAAGAAGAAGTCGAGGTTTCAGTTTCCAAAGAATCAGCAAGAGAAACTACTAAGATAAATGCTGATGAAGCTCCTGCTGATGCTTCTGCACCTCCGACCTCCAATAACAGTGATGGTGATGTTAATATGCAAGATGCAAAGGCTAGTGCTGATACCCCTGTGGTTGAAAATGGTGTCCCTGAGACTGGAGAAAAGCCTGTACAGATGGATGTTGATGAGACCAAGGCTCCAAAGAAGAAGGTTAAGAAAACAAATGTTCCTATAGCAGAGTTAGTTTATGGAGCAATGGCACCTGTGGATGTCCAGAAAGCAGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACTAAGGACAAGAAAAATGCTGTTGAGGCTTATGTTTATGAAACAAGAAACAAGCTCAATGACAAATACCATGACTTTGTCACTGCTTCGGAGAGGGAAGATCTCACTGCTAAGCTTCAAGAGGTGGAAGATTGGCTATATGAGGAGGGTGAAGATGAAACTAAAGGTGTATACATTGCCAAACTTGAAGAGCTGAAAAAGCAAGGTGACCCCATTGAAGAGCGTTACAAAGAATTCACGGAGAGGGGTACAATAATTGAACAGTTCATCTATTGTATAAATAGTTACAGAGAAGCTGCAATGTCAGTTGATCCCAAATTTGATCACATTGACATCAATGAGAAACAGAAGGTCTTAAATGAATGTGTTGAAGCTGAGAACTGGCTTAGGGAAAAGAAGCAGCAGCAAGACTCACTTCCAAAATATGCCAACCCTGTACTCTTGGTAGCTGATATAAGAAAGAAAGCTGAGGCTGTGGATAGGATATGCAAGCCGATTATGACAAAACCAAGGCCAGCCAAGCCAGCTGCTCCACAAGCACCACCAACCCCAGCTTCTCCCAGTGCTGAGCAACAGCAGCAATCTCAGTCAGACGCTAGTGCCAGCACAAATGAGAACGCAGCTGGCGAAGATGTTAGTCAGGCCACTGAACCAATGGAAACTGATAAGTCACAGAATGCCGGTTCTGCTTAA 2556 0.437 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFIGTAGAASTMMNPKNSISQIKRLIGKQFSDPEVQGDLKSLPFSVTEGPDGYPLIHARYLGEVKTFTPTQVFAMMLSNLKEIAQKNLNAGVNDCCIGIPVYFTDVQRRAVLDAATIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSYDRSLGGRDFDEVLFHHFAGKFKEEYKIDVLQNARACLRLRAACEKMKKMLSANPVVPLNIECLMDEKDVKGIMKREEFEELSLPILERVKGPLENALAEAGLSVDDVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGCALECAILSPTFKVREFQVNDSFPFSISLSWKGSGPDAQDSGSDNKQSSLVFPKGNPIPSIKALTFYRSGTFSIDVQYGDVSGLQKPSRISTYTIGPFETKQNEKAKVKVKARLNVHGIVSVDLATLLEEEEVEVSVSKESARETTKINADEAPADASAPPTSNNSDGDVNMQDAKASADTPVVENGVPETGEKPVQMDVDETKAPKKKVKKTNVPIAELVYGAMAPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYETRNKLNDKYHDFVTASEREDLTAKLQEVEDWLYEEGEDETKGVYIAKLEELKKQGDPIEERYKEFTERGTIIEQFIYCINSYREAAMSVDPKFDHIDINEKQKVLNECVEAENWLREKKQQQDSLPKYANPVLLVADIRKKAEAVDRICKPIMTKPRPAKPAAPQAPPTPASPSAEQQQQSQSDASASTNENAAGEDVSQATEPMETDKSQNAGSA 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02405 851 Pfam Hsp70 protein 3 698 IPR013126 GO:0005524|GO:0140662
Car06g02405 851 PRINTS 70kDa heat shock protein signature 2 15 - -
Car06g02405 851 PRINTS 70kDa heat shock protein signature 30 42 - -
Car06g02405 851 PRINTS 70kDa heat shock protein signature 140 160 - -
Car06g02405 851 PRINTS 70kDa heat shock protein signature 332 348 - -
Car06g02405 851 PRINTS 70kDa heat shock protein signature 363 383 - -
Car06g02405 851 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Car06g02405 851 Gene3D Actin; Chain A, domain 4 230 313 - -
Car06g02405 851 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 710 797 IPR029048 -
Car06g02405 851 MobiDBLite consensus disorder prediction 807 832 - -
Car06g02405 851 CDD HSPA4_like_NDB 2 381 - -
Car06g02405 851 Gene3D - 38 113 - -
Car06g02405 851 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 594 IPR029047 -
Car06g02405 851 MobiDBLite consensus disorder prediction 530 544 - -
Car06g02405 851 Gene3D - 5 374 - -
Car06g02405 851 MobiDBLite consensus disorder prediction 792 806 - -
Car06g02405 851 MobiDBLite consensus disorder prediction 505 566 - -
Car06g02405 851 PANTHER HSC70CB, ISOFORM G-RELATED 1 850 - -
Car06g02405 851 MobiDBLite consensus disorder prediction 505 522 - -
Car06g02405 851 Gene3D - 599 708 IPR029048 -
Car06g02405 851 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 697 IPR029048 -
Car06g02405 851 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Car06g02405 851 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 850 - -
Car06g02405 851 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Car06g02405 851 MobiDBLite consensus disorder prediction 784 851 - -
Car06g02405 851 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 630 IPR029047 -
Car06g02405 851 Gene3D - 186 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02405 Car-Chr6 26494504 26500027 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02405 4 406 Calmodulin-binding Proteins AT1G16030 36.453 5.36e-85 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02405 K09489 - gmx:100816539 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02405 06 26494504 26500027 Car06g02405 06 26494504 26500027 ECH