Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02402 ATGATTGGAAATGGTGGCACTGTATCCCAAGGTTCTGTCTTGTGTTATGCTTGTCAAATGCCTGCTAAGGTTGCTGTCTCAAGTATCCGGAGTTTTTGGGGACATAGTTTAGAAAATAAGCCAAAAGGAATGGCATTCACAGACATGTCTTCTGCATCGAGTCTACTTTTAAGCGGGGGTCAAAATCTTCGTTTTCGTACTATCCCCATGTTACCGAGGCTACACAGGTCCTGTACAGCCCCTCGAGCAACGAAGGATGCATCTGGCTTTCGATTTCCTCCAATGACCAAAAAACCAAGATGGTGGTGGAGAACATTAGCATGCCTCCCTTACCTCTTACCTTTCCATCAGGTATGGATGTATGCTCAGACAGCGTACAACCTTCACCCGTTTCTCGAACTATTCGAATTCTACACATACCCTTTTCTCATGGCAATTGGTAGCTTACCTAGATGGTCTCTCATAGCATACTTCTTGATTGCATATCTTACAATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATTTCATGTTGCGGTCGGAATGCTACTCGAGATAGCGCTGCAGGTTACAGGAATTGTGAGCCGTTGGATGCCACTGTCGTGGTACTGGGGGAAATTCGGAATGCATTTCTGGACTACTGCGTTTTTTCTTTTCCTCTTCACTACCATAGAGTGCATAAGGTGCGCCCTTGTTGGCATGTATGCCGATATCCCTTTTTTCTGCGATGCAGCCTATATCCAAATCCCATATGAATAA 762 0.4475 MIGNGGTVSQGSVLCYACQMPAKVAVSSIRSFWGHSLENKPKGMAFTDMSSASSLLLSGGQNLRFRTIPMLPRLHRSCTAPRATKDASGFRFPPMTKKPRWWWRTLACLPYLLPFHQVWMYAQTAYNLHPFLELFEFYTYPFLMAIGSLPRWSLIAYFLIAYLTIVRRKEWPHFFRFHVAVGMLLEIALQVTGIVSRWMPLSWYWGKFGMHFWTTAFFLFLFTTIECIRCALVGMYADIPFFCDAAYIQIPYE 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02402 253 Pfam Chloroplast import apparatus Tic20-like 79 246 IPR005691 -
Car06g02402 253 TIGRFAM 3a0901s05TIC20: chloroplast protein import component, Tic20 family 1 253 IPR005691 -
Car06g02402 253 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 22 253 IPR005691 -
Car06g02402 253 PANTHER HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED 22 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02402 Car-Chr6 26428554 26431262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02402 43 249 Chloroplast and Mitochondria Gene Families AT4G03320 36.916 1.43e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02402 - - gmx:100818669 374.015