Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02393 ATGGCAAGAGAAGGTCTTGGATTTGAAATAACCGAGCTAAGGTTGGGTTTGCCGGGCGGCGAGCCGCCAAGCGTAGTGAAGAATGAGAAGAAGAGGATGTTTTCCGAAATCAACGGTGAAGGAGATGAAAATGAATGTTCGGGTGATCGGAAAATCGATAAGAAGAATCAAGTAGTAGGGTGGCCTCCGGTGTGTTCGTATCGAAAGAAGAATACTATGAATGAAGGTTCAAAAATGTACATGAAGGTTAGTATGGATGGAGCTCCTTTCTTGCGTAAGATTGATCTTGGTATGCATAAGGGATACTTGGAGTTAGCTTTGGCTTTAGAGAAGCTCTTTGATTGTTGTGGAATTGAAGAGGCATTGAAGGATGGGGACAATTGTGAACACGTTCCAATTTATGAAGACAAAGATGGTGACTGGATGCTGGTTGGAGATGTCCCTTGGGAGATGTTTGTTGAGTCATGCAAGAGGCTGAGGATTATGAAGAGATCAGATGCTAAGGGCTTTGGTCTTCAACAAAAAAGGATTCATGTAGAAGCCATGGCTAAGTGA 555 0.4324 MAREGLGFEITELRLGLPGGEPPSVVKNEKKRMFSEINGEGDENECSGDRKIDKKNQVVGWPPVCSYRKKNTMNEGSKMYMKVSMDGAPFLRKIDLGMHKGYLELALALEKLFDCCGIEEALKDGDNCEHVPIYEDKDGDWMLVGDVPWEMFVESCKRLRIMKRSDAKGFGLQQKRIHVEAMAK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02393 184 SUPERFAMILY CAD & PB1 domains 71 163 - -
Car06g02393 184 Pfam AUX/IAA family 45 170 IPR033389 -
Car06g02393 184 ProSiteProfiles PB1 domain profile. 78 166 IPR000270 GO:0005515
Car06g02393 184 Gene3D - 72 175 - -
Car06g02393 184 PANTHER AUXIN-RESPONSIVE PROTEIN IAA6 4 170 - -
Car06g02393 184 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 170 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02393 Car-Chr6 26230524 26234995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02393 70 168 B3 DNA Binding Superfamily AT4G23980 37.374 1.51e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Car06g02393 AUX_IAA 5.5e-44 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02393 K14484 - gmx:547784 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02393 06 26230524 26234995 Car06g02393 06 26230524 26234995 ECH