Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02387 ATGAGCAACTCATTTAAAACTCTCAACAAACAAtttcctcttttctcttttcatcataaactccctcatcatcactctctctcttctttctcatcttcatctaatttctctttccccatcttatctCAATTTCGAACATACTCATCATCTCAATCTGCTACAATTATGGAGGTCTTCAAAGCAATTGCTAAGCAAGAACTTGCATCCCAAGGAAATGTTGCTATCAAAGCTGATCAGCAGAGTTATAGTTACAAGCAGCTCATTTCGTCAGCACAGAATATATCTGATCTCTTGTGTGCAAGTAATGTGAAGGGAAATCTTGGTGGAGCTCGAATCGGAATAGTAGCCAAACCGTCTGCTGAATTTGTTGCTGGAGTACTTGGTACTTGGTTTAGTGGAGGGGTTGCTGTTCCACTTGCACTCAGTTATCCAGAAGTAGAGCTTCTCTATGTGATGGATAATTCGGATGTGTCTGCAATACTGAGTACCGAAGATCATATCGAATTAATGCAAAGCATTGCAAATAAAACCTCTTCTCAGTTTTTTCATATTCCACCTGTTCCTAATAACTCATCAGAGAAAAGCAGAGATGAACATTCACAAAATGGTGAAATTGATGCAGACAGAATTTTCCTGGAAAACATTGAAAGTTCAAGCGAAGATGCGGCGCTGATTTTGTACACTAGCGGGACGACTGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCCTTGCACAGGTCCAAACCTTGATAAAAGCATGGGAGTACACATCTGCAGATCAAATTTTGCATTGTCTACCATTACATCATGTGCATGGGATTTTCAATGGTTTACTTGCCCCTCTCTACGCAGGTTCCACGGTTGAATTCTTGCCAAAATTTAGCGTCAGTGGAATTTGGAAGAGATGGCGCGAGTCATATCCAAAAGAAGGATCCAAGACCGACGATGCCATAACTGTATTCACCGGAGTTCCAACTATGTACACCCGATTAATACAAGGTTATCATGCCATGGATCCTGAGATACAAGCCACTTCAGCATCCGCTGCAAGGAACTTGCGTCTAATGATGTGTGGCTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAATCCATCACCGGACATCGTTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCATTGTCGAATCCGTTGAAAGGTCAGCGCAAAGCAGGCACTGTTGGCAAACCATTTCCTGGTGTGCAGGTCAAGATTCTTGCAGACAAGGATAATGAGAATGAAGAAAATGTAGCTGGTGAGCTTTGTGTTAAAAGCCCTTCATTGTTTAAACAATATTGGAAACTTCCCCAGGTAACGAAGGAATCATTCACAGATGATGGATTCTTTAAAACCGGAGATACAGTCACTACAGATAAAGACGGATATTTCATCATTCTAGGACGTACTAATGCAGATATAATTAAGAGCGGTGGCTATAAGCTGTCTGCATTAGAAATTGAATCAGTAATATTAGAGCATCCAATTGTCTCAGAATGTTGTGTTTTGGGCTTACCAGACAAAGACTACGGAGAAGTTGTTTGTGCGATTGTCGTGCCAGCGGCAAAGCAGAATGACAACCCAAAGCCTGCTCTAACCTTAGAAGAGTTAACCACCTGGGCCAAAGATAAAATTGCACCTTACAAGATACCAACTCGACTAATCGTGTGGGACAAACTCCCTCGCAACGCAATGGGAAAGATAAATAAAAAAGAGATGAAGAAGCTCCTTGTTTCAGAATAG 1779 0.3963 MSNSFKTLNKQFPLFSFHHKLPHHHSLSSFSSSSNFSFPILSQFRTYSSSQSATIMEVFKAIAKQELASQGNVAIKADQQSYSYKQLISSAQNISDLLCASNVKGNLGGARIGIVAKPSAEFVAGVLGTWFSGGVAVPLALSYPEVELLYVMDNSDVSAILSTEDHIELMQSIANKTSSQFFHIPPVPNNSSEKSRDEHSQNGEIDADRIFLENIESSSEDAALILYTSGTTGKPKGVVHTHRSILAQVQTLIKAWEYTSADQILHCLPLHHVHGIFNGLLAPLYAGSTVEFLPKFSVSGIWKRWRESYPKEGSKTDDAITVFTGVPTMYTRLIQGYHAMDPEIQATSASAARNLRLMMCGSSALPQPVMQEWESITGHRLLERYGMTEFVMALSNPLKGQRKAGTVGKPFPGVQVKILADKDNENEENVAGELCVKSPSLFKQYWKLPQVTKESFTDDGFFKTGDTVTTDKDGYFIILGRTNADIIKSGGYKLSALEIESVILEHPIVSECCVLGLPDKDYGEVVCAIVVPAAKQNDNPKPALTLEELTTWAKDKIAPYKIPTRLIVWDKLPRNAMGKINKKEMKKLLVSE 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02387 592 SUPERFAMILY Acetyl-CoA synthetase-like 47 591 - -
Car06g02387 592 PANTHER ACYL-COA SYNTHETASE 3 590 - -
Car06g02387 592 Pfam AMP-binding enzyme 71 488 IPR000873 -
Car06g02387 592 Gene3D - 59 481 IPR042099 -
Car06g02387 592 MobiDBLite consensus disorder prediction 180 200 - -
Car06g02387 592 Gene3D - 484 591 IPR045851 -
Car06g02387 592 CDD MCS 73 587 - -
Car06g02387 592 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Car06g02387 592 Pfam AMP-binding enzyme C-terminal domain 498 579 IPR025110 -
Car06g02387 592 PANTHER MALONATE--COA LIGASE-LIKE 3 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02387 Car-Chr6 26073845 26081293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02387 220 589 Monolignol Biosynthesis Gene Families AT4G19010 26.178 2.53e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02387 K18660 - gmx:100813324 885.945