Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02374 ATGATGATCTTCTCCTTAGTATTGTTTATTAGTTGTTTTTATTTTGGTAGAGCTATAGATTGTGGTGGAAATCAAGTTACAAATACTATTATTGTTGACCAAAATAACAAAGGAGCATTCGTAACAATTCAAGCTGCCATTGACTCTATAAAGAGTCAAAATAAATATTGGATTATGATTAAAATAAATCCTGGCATATACAATGAAAAAGTTCATATACCACTTGGAAAACCATGCATTATTTTAAAAGGATCCGGGAGCAATACCACAACCATTACTTACAATGATTCATTTCGAACTAGAGGCACATCTATGAGTAGTACATTCATGGCAAATCCATCTAATATTATTTTGAGTGGCATTACATTCAAGAACACTTACGGATACGACGGACCTGCAGTTGCAGCTAGTTTATATGGCGATAAATCTGCCATATTCGATTGTAATTTTTTTGGTTATCAAGATACATTGCTCGCAGGAAAGAGACGTTCTTACTTTAAAAATTGTTTTATTCAAGGAGAAATTGATTTTATTTTTGGTGAAGGCCAAACTTATTTTGAGAATTGTGTGATGAATGCCGTACAAGGAGAAAATAGACCTATTGGTTTTGTCACTGCACAGAGAAGAAATGCAGCAAATGATACAAATGGTTTTGTTTTTAGGGGAGGGTCTATTGTTGGAACAGGTCAAGTGAATCTTGGAAGACCGTGGGGCCCTTACTCAAGAGTTATATTTTGGGAAACATATTTTTCATCTGTAGTCACTCCCCAAGGATGGGATAGTTGGGATTTAAAAAATGGCAAAGAGAAAAATACTATTTTCGCAGAAGTAAATTGCAGTGGACCAGGATCCAATACTATGCAGCGTGTTAAGTGGGAGAAGCAACCAAGTAGTTTAAATCTAAATGATTATACTTTATCATCTTTCTTAAATTATGATGGATGGATTGAAAACATACCATCTATAATGTAG 972 0.3416 MMIFSLVLFISCFYFGRAIDCGGNQVTNTIIVDQNNKGAFVTIQAAIDSIKSQNKYWIMIKINPGIYNEKVHIPLGKPCIILKGSGSNTTTITYNDSFRTRGTSMSSTFMANPSNIILSGITFKNTYGYDGPAVAASLYGDKSAIFDCNFFGYQDTLLAGKRRSYFKNCFIQGEIDFIFGEGQTYFENCVMNAVQGENRPIGFVTAQRRNAANDTNGFVFRGGSIVGTGQVNLGRPWGPYSRVIFWETYFSSVVTPQGWDSWDLKNGKEKNTIFAEVNCSGPGSNTMQRVKWEKQPSSLNLNDYTLSSFLNYDGWIENIPSIM 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02374 323 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 322 - -
Car06g02374 323 PANTHER PECTINESTERASE 2 322 - -
Car06g02374 323 Pfam Pectinesterase 30 311 IPR000070 GO:0030599|GO:0042545
Car06g02374 323 Gene3D - 23 321 IPR012334 -
Car06g02374 323 SUPERFAMILY Pectin lyase-like 26 317 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02374 Car-Chr6 25815435 25816884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02374 4 269 Carbohydrate Esterase AT2G19150 45.290 7.85e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02374 - - mtr:MTR_5g088290 415.616