Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02353 ATGTCTCTGAAACGCGGCGGTTTGGGCCGGTTGTTTTTGGGCCCAATGTCGAGCAGTATAATAATGAGAAGCAGTAGTGTTATTGATGGCGCTAACAAGACTACCAGAAAGATTCCCAATTGGTCTACGGGTAATCGATTTCAATACCAAGTCATGTCTTCTCATTACTCTACAAATTCTGTCACGGAGGCTATCACAAAAGGGGCTTCTGATTATTGGATTAAGCCATTGGAAGAACGAGACTTCCAGACTATGTGGAAGCATGTCGTAAAAGGACTTATTATTAATGAAAATCAAAATATGAACGGCATCTTCCATATCAACAACAAACGGGGGAGAGAACAAGTCGATGTTCCAAAGCAAACAATTGATGAAAACCATAGTCATAATGATGATTATCCATCCCCGGCAAAGAAGTTCCGGTGGTCATGGACTCAACAGTTGCATAATCAATTTGTAACAGTGGTCAATGAATTAGGCCTTGAAAATGCAAAGCCCAAAAAAATACTCAAAATAATGGATGTTCCTGGTTTAACCCGAGAACACATTGCTAGCCATTTGCAGCAAAGGGTTTCATGGTTCAAGTTTGTCGACTGCATATAG 603 0.4063 MSLKRGGLGRLFLGPMSSSIIMRSSSVIDGANKTTRKIPNWSTGNRFQYQVMSSHYSTNSVTEAITKGASDYWIKPLEERDFQTMWKHVVKGLIINENQNMNGIFHINNKRGREQVDVPKQTIDENHSHNDDYPSPAKKFRWSWTQQLHNQFVTVVNELGLENAKPKKILKIMDVPGLTREHIASHLQQRVSWFKFVDCI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02353 200 Gene3D - 136 195 - -
Car06g02353 200 SUPERFAMILY Homeodomain-like 138 194 IPR009057 -
Car06g02353 200 PANTHER TWO-COMPONENT RESPONSE REGULATOR 51 191 IPR045279 GO:0009736
Car06g02353 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 143 195 IPR017930 -
Car06g02353 200 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 51 191 - -
Car06g02353 200 Pfam Myb-like DNA-binding domain 143 189 IPR001005 -
Car06g02353 200 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 140 189 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02353 Car-Chr6 25548249 25553294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02353 51 198 Response Regulator Gene Family AT4G31920 36.601 6.22e-23 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g02353 Myb_DNA-binding 8.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02353 - K14491 cam:101509115 315.849