Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02352 ATGGCACAAATTTTGCTTCATGGAACTCTCCATGCTACCATTTATGAAGTTGATAAACTTCAGGCTGGTGGTGGTGGCAATATTTTCAGCATGATCAGGCAAAACATTGAGGAGACTGTTGGTATTGGAAAGGGAGTTACTAAACTCTATGCTACCATTGATTTGGAGAAGGCAAGAGTAGGAAGGACAAGAATTATTGAAAATGAACATACTAATCCGAAATGGTACGAGTCTTTTCACATTTATTGCGGCCATTTGGCTTCAAATATTATATTCACTGTGAAAGACGATAATCCTATTGGAGCAACTTTAATTGGAAGAGCATATGTGCCTGTTGATGAGATCTTGGATGGTGAGGAAATTGATAGATGGGTGGAAATTTTGGACGAGGAAAAAAATCCAATACCTGAGGGTTCGAAGATCCATGTGAAGCTGCAATATTTCGATGTCACGAAAGATCGCAGCTGGGCTCGAGGAATTCAAAGTGCTAAATTTCCTGGAGTTCCGTATACTTTCTTCTCGCAGAGGCAGGGATGTAATGTATCTCTTTACCAAGATGCTCATGTGCCTGATAATTTCGTTCCTAAAATATCGCTATCTGGTGGCAAGACTTATAAGCCTCATAGGTGTTGGGAGGATATTTTCGATGCGATCACTAATGCAAAACATTTGATATACATTACTGGTTGGTCTGTTTATACCGAAATTTCCTTGGTGAGAGATTCTAGGAGGCCTAAGGCTGGGGGAGACGTAACACTAGGTGAGCTTCTCAAGAAAAAGTCTAGTGAAGGTGTTCGAGTTTTGATGCTTGTATGGGATGATAGAACATCGGTTGGTTTGTTGAAAAAGGATGGATTGATGGCTACGCACGATGAAGAAACCGCACAATTCTTCGATGGAACTGATGTGCATTGTGTTTTATGCCCCCGCAATCCTGATGATGGTGGTAGCATCGTTCAAGATTTACAAATTTCAACGATGTTTACTCATCACCAGAAGATTGTGGTTGTGGATAGTGAACTACCTCGTGGAGGGTCGGACAAGCGAAGAATTGTGAGCTTTGTTGGTGGTATTGATCTATGTGATGGAAGATATGATACTGCCTTCCACTCACTTTTCAGAACCCTCGACACGGCACATCATGATGATTTTCATCAACCTAACTTCCCAGGCGCTGCAATCACAAAAGGCGGTCCAAGAGAGCCTTGGCATGACATTCACTCTCGGCTTGAAGGACCTATCGCTTGGGATGTTTTGTTTAACTTTGAGCAGCGATGGAGAAAGCAAGGTGGGAAAGATTTGCTAGTCTCTCTTAGAGAGCTTGAAGATTCTATTATTCCTCCATCCCCAGTGATGTTTCCAAACGATCATGATACATGGAATGTTCAGTTGTTTAGATCGATCGATGGTGGAGCTGCTTTTGGGTTCCCGGAGACTCCTGAAGATGCTGCAAGAGCCGGGCTTATTAGTGGAAAGGACAATATCATAGACCGTAGCATTCAAGATGCATATATTAACGCTATTCGACGTGCGAAGAACTTCATCTATATTGAAAATCAGTATTTCCTCGGAAGCTCTTTCGCATGGAATGGTGATGATATTAAGCCTGAAGACATTGGTGCTTTGCATCTAATCCCAAAGGAACTTTCACTTAAGATTGCTAGTAAGATCGAAGCTGGGGAAAAGTTCACCGTGTATGTGATCGTCCCAATGTGGCCAGAGGGTGTCCCTGAAAGTGCATCAGTTCAAGCAATATTGGATTGGCAGAGAAGAACAATGGAGATGATGTACAAGGATATCGTTCAGGCACTCAGAGCGAAGGGAATCGAGGAAGATCCTCGAAAATATTTGACATTCTTCTGCCTTGGTAATCGGGAGCGAGCACAACAGGCTCGACGTTTCATGATCTATGTTCATACCAAGATGATGATAGTCGATGACGAATACATAATCATTGGATCTGCCAACATCAACCAAAGATCAATGGACGGTGCGAGGGACTCTGAGATAGCAATGGGAGCTTATCAGCCTTACCATTTGGCTACAAGACAGCCAGCACGAGGTCAAGTCCATGGTTTCCGCATGTCGTTATGGTACGAGCATCTCGGCATGCTTGATGAATCCTTCCTCCATCCAGAAAGCGAAGAATGTATCGATAAGGTGAATCAAATTGCTGACAAATATTGGGATCTCTATTCGAACGAGTCGCTCGAGCACGACCTTCCCGGCCACTTGCTTCGATATCCTGTCGGAGTTGCTAGTGAAGGAGATGTCACAGAGCTGCCTGGATTTGAATTCTTCCCTGACACCAAGGCTCGGATTCTCGGCGCCAAAGCTGATTACCTCCCTCCTATCCTCACTACTTAG 2367 0.4368 MAQILLHGTLHATIYEVDKLQAGGGGNIFSMIRQNIEETVGIGKGVTKLYATIDLEKARVGRTRIIENEHTNPKWYESFHIYCGHLASNIIFTVKDDNPIGATLIGRAYVPVDEILDGEEIDRWVEILDEEKNPIPEGSKIHVKLQYFDVTKDRSWARGIQSAKFPGVPYTFFSQRQGCNVSLYQDAHVPDNFVPKISLSGGKTYKPHRCWEDIFDAITNAKHLIYITGWSVYTEISLVRDSRRPKAGGDVTLGELLKKKSSEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETAQFFDGTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSELPRGGSDKRRIVSFVGGIDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVSLRELEDSIIPPSPVMFPNDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFAWNGDDIKPEDIGALHLIPKELSLKIASKIEAGEKFTVYVIVPMWPEGVPESASVQAILDWQRRTMEMMYKDIVQALRAKGIEEDPRKYLTFFCLGNRERAQQARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLATRQPARGQVHGFRMSLWYEHLGMLDESFLHPESEECIDKVNQIADKYWDLYSNESLEHDLPGHLLRYPVGVASEGDVTELPGFEFFPDTKARILGAKADYLPPILTT 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02352 788 Pfam Phospholipase D C terminal 706 778 IPR024632 -
Car06g02352 788 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824
Car06g02352 788 PANTHER PHOSPHOLIPASE D 2 788 IPR015679 -
Car06g02352 788 Pfam C2 domain 9 127 IPR000008 -
Car06g02352 788 Pfam PLD-like domain 505 670 IPR025202 -
Car06g02352 788 Gene3D Endonuclease Chain A 483 680 - -
Car06g02352 788 PIRSF PLD_plant 1 788 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Car06g02352 788 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 150 IPR035892 -
Car06g02352 788 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 634 661 IPR001736 GO:0003824
Car06g02352 788 Gene3D C2 domain 6 159 IPR035892 -
Car06g02352 788 SUPERFAMILY Phospholipase D/nuclease 449 718 - -
Car06g02352 788 SMART C2_3c 9 124 IPR000008 -
Car06g02352 788 Pfam Phospholipase D Active site motif 326 364 IPR001736 GO:0003824
Car06g02352 788 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Car06g02352 788 PANTHER PHOSPHOLIPASE D ALPHA 1 2 788 - -
Car06g02352 788 SUPERFAMILY Phospholipase D/nuclease 151 444 - -
Car06g02352 788 SMART pld_4 326 364 IPR001736 GO:0003824
Car06g02352 788 SMART pld_4 634 661 IPR001736 GO:0003824
Car06g02352 788 Gene3D Endonuclease Chain A 200 444 - -
Car06g02352 788 CDD C2_plant_PLD 2 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02352 Car-Chr6 25483559 25487519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02352 1 788 Phospholipase D Gene Family (Wang group) AT3G15730 81.605 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02352 K01115 - gmx:100786410 1502.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02352 06 25483559 25487519 Car01g02859 01 53738939 53743921 ECH
Car06g02352 06 25483559 25487519 Car06g02352 06 25483559 25487519 ECH
Car01g02859 01 53738939 53743921 Car06g02352 06 25483559 25487519 PCT