Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02313 ATGGCAACAAGTGATGGAATTAAGAAGGTTTGTGTAACAGGTGCAGGAGGGTTTGTAGCATCATGGCTTGTTAAGGTTCTACTTTCCAAAGGTTACTCTGTTCATGGAACTGTTAGACAACCTGGTAGTCAGAAATATGAACACTTGCTGAAACTTGAGAGAGCTTCTGAAAACCTTACACTCTACAAAGCAGATATCTTGAATTATGAATCTGTTTACTCTGCAATTGTTGGATGTAGTGCAGTTTTCCATGTTGCTTGCCCTGTACCCTCAACAGAGCTGCCTAATCCTGAGGTGGAAGTGATTGAGCCAGCAGTGAAGGGAACTGTTAATGTACTTGAAGCTTGTCTTAAAGCAAAAGTTGAACGCGTTGTCTTTGTATCATCTGCAGCTGCTGTTGTTTTGAACCCTAATTTTCCTAAGGATAAAGTGTTTGATGAGTCTTGTTGGTCTGACAAAGACTACTGCAAAGAAACCAAGAACTGGTATTGTTATTCCAAGACAGAAGCAGAAGAGCAGGCCTTGAATTTTGCAAAAAGAACTGGGCTTAGTGTGGTAAGCATTTGTCCTACCCTTGTTTTGGGGCCAATTTTGCAGTCAACCACTAATGCAAGTAGCTTGGCTGTCATCAAACTTTTAAAAGGCTATGATTCGTTGGAGAATAAGCATCGTTGGATAGTTGACGTAAGAGACCTAGTTGATGCAATACTTTTGGCTTATGAGAAGCACGACGACGCGGAAGCAAGATACATATGCACTTCACACGGTATCACGACACGAGATTTGGCTGAGAAATTGAAGAGTATATATCCAAACTATAAGTACCCTACAAACTATATTGAAGTGGATGATTACAAAATGTTGAGCTCAGAGAAACTGAAAAGTTTGGGTTGGAAATACAGGACATTGGAGGAAACACTCATTGATTCAGTTGAGAGCTATAAAGAAGCTGGACTCCTTCAATCACAATAA 972 0.4033 MATSDGIKKVCVTGAGGFVASWLVKVLLSKGYSVHGTVRQPGSQKYEHLLKLERASENLTLYKADILNYESVYSAIVGCSAVFHVACPVPSTELPNPEVEVIEPAVKGTVNVLEACLKAKVERVVFVSSAAAVVLNPNFPKDKVFDESCWSDKDYCKETKNWYCYSKTEAEEQALNFAKRTGLSVVSICPTLVLGPILQSTTNASSLAVIKLLKGYDSLENKHRWIVDVRDLVDAILLAYEKHDDAEARYICTSHGITTRDLAEKLKSIYPNYKYPTNYIEVDDYKMLSSEKLKSLGWKYRTLEETLIDSVESYKEAGLLQSQ 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02313 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 321 - -
Car06g02313 323 Pfam NAD dependent epimerase/dehydratase family 10 247 IPR001509 -
Car06g02313 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 315 IPR036291 -
Car06g02313 323 Gene3D - 2 323 - -
Car06g02313 323 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 8 321 - -
Car06g02313 323 CDD FR_SDR_e 10 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02313 Car-Chr6 24488894 24492180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02313 9 320 Monolignol Biosynthesis Gene Families AT2G33590 60.510 2.08e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02313 - - mtr:MTR_4g009040 530.406