Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02309 ATGTTATCATGTTGGTACAATATGGTGTCTTGTGCTTTGCCATTGCCACCTGCTCCTATCCCTCTTGCTAAAAAGGTTGCAGCAGAGTTTATAGGCACATTCATTCTAATGTTTGCTGGAATGGGAAGTGCAATAGAGAACGAAAAGGTTGAAAATTCAGAGACACTAATTGGATGTGCTGGAGCTAGTGGACTTGCTGTTATGATCATAATTCTATCAACTGGTCATATCTCTGGTGCTCATCTCAATCCTGCTGTTACCATCTCATTTGCTGCATTGAAGCATTTTCCTTGA 294 0.4082 MLSCWYNMVSCALPLPPAPIPLAKKVAAEFIGTFILMFAGMGSAIENEKVENSETLIGCAGASGLAVMIIILSTGHISGAHLNPAVTISFAALKHFP 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02309 97 PANTHER BNAA02G36290D PROTEIN 8 97 - -
Car06g02309 97 PRINTS Major intrinsic protein family signature 24 43 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02309 97 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02309 97 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Car06g02309 97 SUPERFAMILY Aquaporin-like 22 97 IPR023271 -
Car06g02309 97 Pfam Major intrinsic protein 22 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02309 97 PANTHER AQUAPORIN NIP2-1 8 97 IPR034294 -
Car06g02309 97 Gene3D Glycerol uptake facilitator protein. 19 97 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02309 Car-Chr6 24351703 24352943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02309 9 97 Major Intrinsic Protein MIP AT1G80760 67.416 3.25e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02309 K09874 - gmx:100798410 131.724