Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02308 ATGAATGGTGGAGTGACGGTTCCTTCGGTAGCAATTGGTGAAGCTTTTGCATTAGAATTCATTATTGGCTTTAATCTCATGTTTGTTGTCACTGATGTTGCCACCGACACAAGAGCTGTAAATGGGAGAACTGTTGTTGCCACCGACACAAGGGTTATGGGAGAATTTGCGGGAATCGCGGCGGGAGCCACCGTCAAGCTCAACATACTCATAGCCGGGCCTGCAACTGGAGGTTCAATGAATCCAGTAAGAGCACTGGGCCCAGCAATTGCTGCAGACAACTTTAGAGACATATGGTTATATCTCATAGCTCCTATTCTTGGAGATCTAATTGGGGCAGGTGCATACATTGCTGTCAAATTGCCTGATGAAGAATTTAAATGA 384 0.4557 MNGGVTVPSVAIGEAFALEFIIGFNLMFVVTDVATDTRAVNGRTVVATDTRVMGEFAGIAAGATVKLNILIAGPATGGSMNPVRALGPAIAADNFRDIWLYLIAPILGDLIGAGAYIAVKLPDEEFK 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02308 127 PRINTS Major intrinsic protein family signature 18 36 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02308 127 PRINTS Major intrinsic protein family signature 62 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02308 127 PRINTS Major intrinsic protein family signature 99 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02308 127 SUPERFAMILY Aquaporin-like 4 125 IPR023271 -
Car06g02308 127 PANTHER AQUAPORIN NIP2-1 44 126 IPR034294 -
Car06g02308 127 Pfam Major intrinsic protein 6 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02308 127 Gene3D Glycerol uptake facilitator protein. 2 125 IPR023271 -
Car06g02308 127 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 41 - -
Car06g02308 127 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 44 126 - -
Car06g02308 127 PANTHER AQUAPORIN NIP2-1 1 41 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02308 Car-Chr6 24348140 24351539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02308 1 125 Major Intrinsic Protein MIP AT1G80760 69.600 5.62e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02308 K09874 - gmx:100815637 162.54