Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02289 ATGTCCTATAGAGATGAAAAAAGGGGATCTTCATCGTCTAATCTTCCGAGTAAGAGAGATATGGACAATGAAGAAATTCCATCAATACCCGGAACACCTGGAAATGCAACACCTGGTACACCTGGTGCCCCTCTTTTTGGTGGCTTAAAGCCTGAGAAAAATGGAAATCGTTCTGTTGGTAGAAATAAATCACTTCTGAAGAATATGAATTGTTTTGCTGTTGAAGAATGGAATTTGGAAGATGGTTCTTTACCTAGAGTCTCTTGTGCTTTGCCATTGCCACCTGCTCCTATCCCTCTTGCTAAAAAGGTTGGAGCAGAGTTTATTGGCACATTCATTCTAATGTTTGCTGGAATTGGAACTGCAATAGAGAACCAAAAGGTTGAAAATTCAGAGACACTAATAGGATGTGCTGGAGCTAGTGGACTTGCTGTTATGATCATAATTCTATCAACTGGTCATATCTCTGGTGCTCATCTCAATCCTGCTGTTACCATCTCATTTGCTGCATTGAAGCATTTTCCTTGGAAGAATGTGGGAGAACTTGCGGGAATTGCGGTGGGAGCCACCGTCATGCTCAACATACTCATAGCAGGGCCTGCAACTGGAGGTTCAATGAATCCAGTAAGAACACTGGGCCCAACAATTGCTACAAACAACTTCAGAGGCATATGGTTATATCTCATAGCTCCTATTCTTGGAGCTCTAACTGGGGCAGGTGCATACACTGTTGTCAAATTGCCTGATGAAGAATTTAACCCTGAGTTAAAAGCCTCTTCTGCCCCTGGAAGTTTAAGAAGATGA 804 0.4241 MSYRDEKRGSSSSNLPSKRDMDNEEIPSIPGTPGNATPGTPGAPLFGGLKPEKNGNRSVGRNKSLLKNMNCFAVEEWNLEDGSLPRVSCALPLPPAPIPLAKKVGAEFIGTFILMFAGIGTAIENQKVENSETLIGCAGASGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKNVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPTIATNNFRGIWLYLIAPILGALTGAGAYTVVKLPDEEFNPELKASSAPGSLRR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02289 267 PRINTS Major intrinsic protein family signature 141 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02289 267 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02289 267 PANTHER AQUAPORIN NIP2-1 178 251 IPR034294 -
Car06g02289 267 PANTHER BNAA02G36290D PROTEIN 23 179 - -
Car06g02289 267 Pfam Major intrinsic protein 179 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02289 267 Pfam Major intrinsic protein 101 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02289 267 ProSitePatterns MIP family signature. 159 167 IPR022357 -
Car06g02289 267 Gene3D Glycerol uptake facilitator protein. 179 257 IPR023271 -
Car06g02289 267 PANTHER AQUAPORIN NIP2-1 23 179 IPR034294 -
Car06g02289 267 Gene3D Glycerol uptake facilitator protein. 97 178 IPR023271 -
Car06g02289 267 MobiDBLite consensus disorder prediction 1 17 - -
Car06g02289 267 SUPERFAMILY Aquaporin-like 99 255 IPR023271 -
Car06g02289 267 PANTHER BNAA02G36290D PROTEIN 178 251 - -
Car06g02289 267 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02289 Car-Chr6 24070931 24081318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02289 177 259 Major Intrinsic Protein MIP AT1G80760 74.699 6.01e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02289 K09874 - dcr:108195280 246.128