Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02284 ATGGATCAAGAAAAAGAACAAAGTTTCAAAAACCCAAGAAACATAATCTTCAACAAATACGAAATGGGTAAAGTATTGGGTCAAGGAAACTTTGCAAAGGTTTATCATTGTAGAAACCTTTCAACAAATGAGAGTGTAGCAATCAAGGTGATAAAAAAAGAGAAGCTTAAAAAAGAGAGGCTAGTGAAGCAAATCAAGCGTGAAGTTTCGGTTATGCGTCTAGTTCATCACCCTCATGTTGTTGAACTCAAAGAAGTTATGGCAACAAAGAGAAAAATCTTTCTTGTAATGGAATATGTAAAAGGAGGTGAACTCTTCACCAAAGTAGAAAAAGGAAAATTGAAAGAAGATGTTGCAAGAAAGTACTTTCAACAACTTATCAGTGCCGTTGATTTTTGTCATAGCCGCGGTGTCACACACCGCGATTTAAAACCAGAGAATTTACTTCTGGATGAAAATGAAGACTTAAAAGTCTCTGATTTTGGACTCTCGGCGTTGCCAGAACAACGCCAAGAGGATGGAATGCTTTTAACTCCGTGTGGGACCCCTGCATACGTGGCACCCGAGGTATTGAAGAAAAAAGGGTATGATGGTTCTAAGGCTGATTTATGGTCTTGTGGAGTTATTCTCTATGCTTTGCTTTGTGGATATCTTCCTTTTCAAGGTGAGAATGTTATGAGAATTTATAGAAAGGCTTTTAGAGGTGAATATCAATTTCCTGAATGGATTTCTCCACAAGCTAAAACATTGATTTCAAATCTTCTTATTGTTGATCCTAAAAAAAGGTATTCCATTTTTGATATTATGAATGATCCTTGGTTCCAAATTGGGTTTGTTAGACCCATTGGGTTTTCAACGAACGAGTCGAGTATCGAAGACAACGACACAAATTTTGATTTCATGGAGGATTTGGATGTTCCGGAATTGATAATGACAAAACCATCTCGTCCTTTTTATAATGCTTTTGAGATTATTTCGTCGTTGTCTCATGGTTTTGATCTTAGGAATTTGTTTGAGACGAGAAAGAGGTTGCCATCGACATTCATATCAAAATTCTCGGCTTCATCGGTTTTGATGAAGCTTGAGGAGATGGCGAAGAAGTTGAATTTTAGGATAACGGGGAAGAATGAGTTTGTAGTGAGAATGGAGGGAGCAACGGAGGGGAGAAAGGGGAAGGTGGCGATGATGGTGGAGGTATTTGAGGTGGCGCCAGAGATAGCGGTGGTTGAGTTTTTTAAATGTGGCGGAGACACAATGGAATATGTTAAGTTGTGTGACGAACAAGTAAGACCTTCCCTCAAAGATATTGTTTGGAGTTGGCAAGGTGACACTAATAATGATGATATATCTTAA 1353 0.3829 MDQEKEQSFKNPRNIIFNKYEMGKVLGQGNFAKVYHCRNLSTNESVAIKVIKKEKLKKERLVKQIKREVSVMRLVHHPHVVELKEVMATKRKIFLVMEYVKGGELFTKVEKGKLKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRQEDGMLLTPCGTPAYVAPEVLKKKGYDGSKADLWSCGVILYALLCGYLPFQGENVMRIYRKAFRGEYQFPEWISPQAKTLISNLLIVDPKKRYSIFDIMNDPWFQIGFVRPIGFSTNESSIEDNDTNFDFMEDLDVPELIMTKPSRPFYNAFEIISSLSHGFDLRNLFETRKRLPSTFISKFSASSVLMKLEEMAKKLNFRITGKNEFVVRMEGATEGRKGKVAMMVEVFEVAPEIAVVEFFKCGGDTMEYVKLCDEQVRPSLKDIVWSWQGDTNNDDIS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02284 450 PANTHER - 11 446 - -
Car06g02284 450 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Car06g02284 450 CDD CIPK_C 320 434 - -
Car06g02284 450 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02284 450 Gene3D Transferase(Phosphotransferase) domain 1 11 317 - -
Car06g02284 450 ProSiteProfiles NAF domain profile. 314 339 IPR018451 GO:0007165
Car06g02284 450 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02284 450 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02284 450 Coils Coil 48 68 - -
Car06g02284 450 Gene3D Kinase associated domain 1, KA1 318 439 - -
Car06g02284 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Car06g02284 450 Pfam NAF domain 318 373 IPR004041 GO:0007165
Car06g02284 450 PANTHER CBL-INTERACTING PROTEIN KINASE 16 11 446 - -
Car06g02284 450 SUPERFAMILY Protein kinase-like (PK-like) 16 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02284 Car-Chr6 23994080 23996123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02284 1 449 CBL-interacting serine-threonine protein kinases AT5G25110 58.667 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car06g02284 Pkinase 2e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02284 - - gmx:100812424 705.671