Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02283 ATGGATTGTTCATCATATATCAATACTTCATTGGATCTCAACATTAATCCTTATAGAGTTCATGAAGAAGTTCCTAAGAAGGAGGTTGGAAGCAAACTTTTCTCCTTGGGGATGACCAAGTTTTCTTTGAAAGAAGAGTCCACTGATGAATTAGAGGAGGAGCTGAAAAGGGTGACTGCAGAAAACAAAAAATTGGTGGAAATGCTCTCAGTGGTTTGTGAGAACTACAACAGTTTGAGAAGCCATTTGATGGAATATATGAGGAGAAATCCTGAGAAGGAACTTAGCACATCATCAAAAAAAAGGAAATCTGAAAGCAGCAATAATAACAATAATAGTAATTTGATGGGAATCAACAACAATGGAAACTCTGAGAGTAGCTCTACTGATGAAGAATCATGTAAGAAACCAAAGGAGGAAGAAAACATCAAAGCCAAAATTTCAAGAGCTTATGTTAGGACTGAAGCATCTGATACAGGCCTTATTGTGAAGGATGGATATCAATGGAGGAAATATGGACAAAAAGTGACTAGAGATAACCCTTGTCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTGCTTGTTGCTACTTATGAAGGGGAGCACAATCATCCTCAATCATCTCCAATGGAGGCAACATCCGGTTCCGGCCGTAGCGTGAGCCTTGGTTCGGTACCTTGTTCAGCTTCTCTCAACTCAACAGCACCAAAAGTTGTTACTCTTGACTTAACAAATTCTAAGAGCAGTAAAGATTCTAAGAATAATGAACCAAGAAAAGATTCACCTAAGTTACCAAAGAATTTGGTGGAACAAATGGCTACTTCTTTGACAACTGATCCTAATTTTAGAGCAGCACTTGTTGCAGCCATATCAGGAAGATTGATGCACAATAATTAA 948 0.385 MDCSSYINTSLDLNINPYRVHEEVPKKEVGSKLFSLGMTKFSLKEESTDELEEELKRVTAENKKLVEMLSVVCENYNSLRSHLMEYMRRNPEKELSTSSKKRKSESSNNNNNSNLMGINNNGNSESSSTDEESCKKPKEEENIKAKISRAYVRTEASDTGLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQSSPMEATSGSGRSVSLGSVPCSASLNSTAPKVVTLDLTNSKSSKDSKNNEPRKDSPKLPKNLVEQMATSLTTDPNFRAALVAAISGRLMHNN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02283 315 SUPERFAMILY WRKY DNA-binding domain 161 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g02283 315 MobiDBLite consensus disorder prediction 257 283 - -
Car06g02283 315 Pfam WRKY DNA -binding domain 164 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g02283 315 Gene3D WRKY domain 145 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g02283 315 MobiDBLite consensus disorder prediction 266 282 - -
Car06g02283 315 MobiDBLite consensus disorder prediction 90 142 - -
Car06g02283 315 MobiDBLite consensus disorder prediction 216 238 - -
Car06g02283 315 ProSiteProfiles WRKY domain profile. 162 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g02283 315 PANTHER TRANSCRIPTION FACTOR 1 315 - -
Car06g02283 315 MobiDBLite consensus disorder prediction 102 128 - -
Car06g02283 315 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 315 IPR044810 GO:0003700
Car06g02283 315 SMART WRKY_cls 163 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g02283 315 MobiDBLite consensus disorder prediction 218 238 - -
Car06g02283 315 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02283 Car-Chr6 23942097 23944739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02283 4 315 WRKY Transcription Factor Family AT1G80840 51.543 5.60e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g02283 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02283 - - gmx:100807966 437.573