Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02275 ATGTGCCAGAAGCAGTGTCGTGATGAGAATGGGTTTAAATGCCACTGTATGAGTGAAGGGCACCAGCGTCAAATGCAGATTTTTGGACAAAACCCCACCCGCATAATTGAGGGTTATACCGAAGAGTTCGAGACAACTTTTCTCGAGCATATGAAGCGAAGTCATCGGTTCAGCCGTGTGGCTGCAACTGTAGTTTATAATGAATACATAAATGATAGAAACCATGTTCATATGAACTCCACGCAGTGGGCCACACTTACTGAGTTTGTTAAGTACTTGGGTCGAACTGGAAAGTGTAAGGTTGAAGAAACACCCAAGGGATGGTTCATTACATATATAGATAGAGATTCAGAAACACTTTTCAAGGAGAGGATGAAGAATAAGAGAGTCAAGGCAGATTTGGTAGATGAAGAAAAGCAAGAGAAGGAGATCATGAAACAGATTGAAAGGGCTGAGCAATTGATGCAACTATCTAATCCTGAGTCTGGTCAGCCTTCACAGATTGAGCCTCCGAGGGAGCTAAATGTAGAAGATGGAATTAAGATAGGATTTTCTCTTGGGTTATCTGCTAGACCTATGACCAAGGAAAAAGGTGAGGCATCGGCGATGGTTTTTGATGAGGTCGATGAAGAGGAATATGAGGAAAGGAATCCTAGAAACAATCTGAAGAGGAAAGAAAGTGGTGGTGGAAAATCAACATTGGAAGAAATGATCAGGGAGGAGGAGAGGAAAAAGGAAAAAATAAACAGGAAGGATTATTGGTTGCATGAGGGAATTGTTGTTAAGGTTATGAGCAAAGTGTTGGCAGAGAAAGGGTATTACAAGCAAAAGGGGGTTGTGAGAAAGGTGATTGACAAGTATGTAGGGGAAATAGAAATGCTAGAAAGCAAGCATGTGGTAAGAGTTGATCAGGAAGAGCTTGAAACTGTGATTCCACAGGTTGGGGGCCGTGTAAAAGTAGTCAATGGGGCATACCGTGGATCACTTGCGAGGCTTCTGGGGGTGGATACAGATCATTTTTGTGCTAAGGTGCAGATAGAAAAAGGACCCTATGATGGTAGGGTACTTAAAGCCGTGGAATATGAGGACATTTGTAAATTAGCATAG 1107 0.4237 MCQKQCRDENGFKCHCMSEGHQRQMQIFGQNPTRIIEGYTEEFETTFLEHMKRSHRFSRVAATVVYNEYINDRNHVHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRVKADLVDEEKQEKEIMKQIERAEQLMQLSNPESGQPSQIEPPRELNVEDGIKIGFSLGLSARPMTKEKGEASAMVFDEVDEEEYEERNPRNNLKRKESGGGKSTLEEMIREEERKKEKINRKDYWLHEGIVVKVMSKVLAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVVRVDQEELETVIPQVGGRVKVVNGAYRGSLARLLGVDTDHFCAKVQIEKGPYDGRVLKAVEYEDICKLA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02275 368 Gene3D - 258 311 - -
Car06g02275 368 CDD KOW_KIN17 314 367 IPR041995 -
Car06g02275 368 Coils Coil 231 251 - -
Car06g02275 368 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 368 IPR037321 -
Car06g02275 368 Coils Coil 127 157 - -
Car06g02275 368 Gene3D - 312 368 IPR014722 -
Car06g02275 368 MobiDBLite consensus disorder prediction 209 234 - -
Car06g02275 368 Gene3D - 31 131 IPR038254 -
Car06g02275 368 SMART Kin17_mid_2 23 149 IPR019447 -
Car06g02275 368 MobiDBLite consensus disorder prediction 214 234 - -
Car06g02275 368 Pfam KN17 SH3-like C-terminal domain 250 303 IPR041330 -
Car06g02275 368 Pfam Domain of Kin17 curved DNA-binding protein 23 148 IPR019447 -
Car06g02275 368 PANTHER BNAA05G13760D PROTEIN 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02275 Car-Chr6 23884940 23886046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02275 1 368 C2H2 Transcription Factor Family AT1G55460 67.539 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02275 K13102 - gmx:100784271 635.565