Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02273 ATGTTTGACTCTGGTTACAAGTCACAGTATATTGGAGGCCATAAGGAGAAATTTGTGAGGTTGGATGATTTGGATTCTAATTTGTCCATGCCATCTAGCTCTAGTGGGATGAAGAAATTAAGATTTAATTTAAACTCTTTGCCTATACCTATTCCCGGTCGCGGAAGAAAAAATCCATCGAAATCGTTTCGAGTAGGTGTAAAGAGGGGATCAGATGGACTATGGAATATTGGAAGATCACTCAAAAGTGGAGTCACATGGGCAGTATTTCCAGAAGATCTTAAAGTGTCACAGAAAAAAGTGTTTGATCCTCAAGATAAGAATCTTCTATATTGGAACAAGTTTTTCGAGATTCTATGCATTCTTTCTATAGCTTGTGATCCTTTCTTCTTTTATCTTCCTTATTTCAACCACAAATCATTTTGTTTAGCCATAGATAACAAACTAGCAAGTTTTGCTGTTACATTGAGAACAATATGTGATTGCGTTTATCTCATTCGAATAAGTTTCCAATTCCGCACTGCCTTCATCGCGCCTTCGTCTCGAGTATTTGGAAGAGGTGAACTTGTCATAGATCCTGCATTGATAGCAAAGAGATATTTACAACGATACTTTGTTGTTGACTTATTGTCTATTATTCCTATGCCCCAGATTGTAGTGTGGAAATATCTTTATAGTTCAAGACGTATGGAGGTATTGGATACAAAAACATCACTCTTGAGAAATGTCATCATGCAATATTTTCCAAGATTCATACGCTTTATACCTTTGGCTTCAGAAGTTAAAAAGACAGCTGGTGTTTTTTCTGAAAATGCATTGCTTGGTGCCATGTACTATTTGATCTGGTATATGCTTGCTAGCCATATAACGGGCTCTGTGTGGTACTTATTAGCAATAGAACGTAACGACACATGCTGGAAGAATGCTTGTAAAGAAGTTGAAGGATGTAATTCACATTTCCTGTATTGTGGAAGTTCAAGTAAGCATATGTCAGGGTATGAAAGTTGGAGAAATGTTAGTGAATCTGTTCTTAAAAGTAAATGCTTTGTTGAAGATGATAACTCAGCCTTTAATTATGGAATCTTCTCACAAGCTATAGAGTCTGATATTGTTGCTTCTGTAGAAGTCTTTCCCAAATTTTGTTATTGCCTGTGGTGGGGACTTCAGAATTTGAGTACACTTGGTCAGGGGCTTCTAACTAGTACCTACCCTGGAGAGGTTATGTTTTCCATAGTAATAGCTATTATGGGGCTTGTGCTTTTTTCTCTTCTCATTGGAAACATGCAGACCTACCTTCAATCAATGTCAGTTCGTTTGGAGGAGATGAGGATCAAAAGACGTGACTCTGAGCAAGTCAGACGCTACGATCAATACAAGTGGTTGAACACCCGAGGAGTAGATGAAGAAACTTTGGTTCAAAGTCTTCCAAAGGATCTCAGAAGAGATATAAAACGCCATCTTTGTTTGAATTTGGTCAGAAGGGTTCCTCTCTTTGCTAACATGGATGAACGTTTGCTTGACGCTATATGTGAACGATTGAAACCAAGTTTATATACAGAAGGAACCTACATAATTAGAGAAGGTGATCCAGTCGATGAGATGTTGTTCATCATTCGTGGTCGTCTAGAGAGTGTTACTACAGACGGTGGAAGAAGCGGCTTTTTCAACAGAGGAGTTTTGAAGGAAGGTGACTTTTGCGGTGAAGAGTTGCTAACATGGGCATTGGACCCAAAATCTGCAGCTAACTTGCCATCATCAACAAGAACAGTGAAAGCTATGAGTGAGGTGGAAGCATTTGCTTTGGAAGCAGAGGAATTGAAGTTCGTCGCATCACAGTTTAGACACATACATAGTCGACAAGTTCAGCATACATTCCGATTCTACTCGCAGCAATGGAGAACATGGGCTGCAATCTACATTCAAGCCGCATGGAGGAAGCATTTACGAAGAAAACGCAGGAAGGAGGAAGAAGAATTATATGAATCTGATTATGGAGGAAGTGATGATTCTACAAAGGCTTTGGTTCCGCGCGCTCAAAATTCGTCAAGATTTGGAATTAATACAACTGCCTATGTTTCTCGCTTCGCTGCTAATGCCCTTCGTGGTCACAAACTTCGAGTTTCAAGTTCAAGAAGTTTGGTGACAATCCAAAAGCCCTCAGAACCTGACTTCAGTGCTCTTGATGATGAAGAGTAA 2196 0.3939 MFDSGYKSQYIGGHKEKFVRLDDLDSNLSMPSSSSGMKKLRFNLNSLPIPIPGRGRKNPSKSFRVGVKRGSDGLWNIGRSLKSGVTWAVFPEDLKVSQKKVFDPQDKNLLYWNKFFEILCILSIACDPFFFYLPYFNHKSFCLAIDNKLASFAVTLRTICDCVYLIRISFQFRTAFIAPSSRVFGRGELVIDPALIAKRYLQRYFVVDLLSIIPMPQIVVWKYLYSSRRMEVLDTKTSLLRNVIMQYFPRFIRFIPLASEVKKTAGVFSENALLGAMYYLIWYMLASHITGSVWYLLAIERNDTCWKNACKEVEGCNSHFLYCGSSSKHMSGYESWRNVSESVLKSKCFVEDDNSAFNYGIFSQAIESDIVASVEVFPKFCYCLWWGLQNLSTLGQGLLTSTYPGEVMFSIVIAIMGLVLFSLLIGNMQTYLQSMSVRLEEMRIKRRDSEQVRRYDQYKWLNTRGVDEETLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTEGTYIIREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGVLKEGDFCGEELLTWALDPKSAANLPSSTRTVKAMSEVEAFALEAEELKFVASQFRHIHSRQVQHTFRFYSQQWRTWAAIYIQAAWRKHLRRKRRKEEEELYESDYGGSDDSTKALVPRAQNSSRFGINTTAYVSRFAANALRGHKLRVSSSRSLVTIQKPSEPDFSALDDEE 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02273 731 Gene3D - 113 431 - -
Car06g02273 731 SUPERFAMILY Voltage-gated potassium channels 104 433 - -
Car06g02273 731 Gene3D Jelly Rolls 495 615 IPR014710 -
Car06g02273 731 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 727 - -
Car06g02273 731 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 12 727 - -
Car06g02273 731 SMART cnmp_10 497 628 IPR000595 -
Car06g02273 731 Pfam Ion transport protein 111 438 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car06g02273 731 SUPERFAMILY cAMP-binding domain-like 429 617 IPR018490 -
Car06g02273 731 CDD CAP_ED 497 628 IPR000595 -
Car06g02273 731 ProSiteProfiles cAMP/cGMP binding motif profile. 497 627 IPR000595 -
Car06g02273 731 Pfam Cyclic nucleotide-binding domain 518 607 IPR000595 -
Car06g02273 731 Gene3D Helix hairpin bin 432 488 - -
Car06g02273 731 ProSiteProfiles IQ motif profile. 633 662 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02273 Car-Chr6 23861775 23867367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02273 6 726 Ion Channels AT1G15990 66.000 0.0 965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02273 K05391 - gmx:100810453 1213.75