Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02260 ATGGGGATATACCTGAGTACCCCAAAAACAGAGAAGGCATCTGAAGATGGTGAGAATGACATGCTTCGTTTTGGATTGTCTTCCATGCAGGGTTGGCGCGCTTCTATGGAAGATGCTCATGCAGCTCATCCATATTTGGACGAATCTACATCTTACTTTGGTGTTTATGATGGCCATGGAGGTAAAGCTGTTTCAAAATTCTGTGCCAAGTATCTACACCAGCAAGTGCTTAAGCATGAAGCTTATGTAGCTGGAGATATAGCCACGTCTTTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAATCTTGGGAGATAAAATGGAAAAGTTGTCTGGTATGCTAGAGGGGTTTATATGGTCTCCCAAGAGCAGTGAAGCCAATGACCGTGTCGATGCGTGGGCTTTTGAGGAGGGACCCCATTCTGATTTCAGTGGGCCAAACTGTGGAAGCACAGCGTGTGTGTCTGTCATCAGAGGAAACAGACTTGTTGTTGCAAATGCTGGTGACTCAAGATGTGTGTTATCAAGGAAAGGCCAGGCACACAATTTGTCTAAAGATCACAAGCCTGACCTTGAAGTTGAGAAAGACAGGATTAAGAAAGCTGGTGGTTTCATCCAAGTTGGACGGGTCAATGGAAGTTTGAACTTGGCCAGAGCAATTGGAGATATGGAATTCAAGCAGAACAAGTATTTGCCTGCTGAAAAGCAGATTGTGACTGCTGATCCGGACGTAACTTCGGTTGAGCTTTGCGATGATGATGAGTTTCTTGTGATAGCTTGTGATGGGATATGGGATTGTATGTCCAGCCAACAGCTTGTGGACTTTATACATGGCCAGTTAAAGACAGAGAATAAACTTTCTGCAGTTTGCGAGAAAGTGTTTGACCGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATTTTGATTCAGTTCAAAAAACTTCCAACTTCAGATGCTTCGGTCAAAGACCAGCCTCAGCCATCTGCTCAACCGACCCCCACTCCTCCAATTCCAGATACTTCTGCTCAACCGTCTGAAGCTGGCAGAAGTTAG 1104 0.4529 MGIYLSTPKTEKASEDGENDMLRFGLSSMQGWRASMEDAHAAHPYLDESTSYFGVYDGHGGKAVSKFCAKYLHQQVLKHEAYVAGDIATSLQKSFLRMDEMMRGQRGWRELAILGDKMEKLSGMLEGFIWSPKSSEANDRVDAWAFEEGPHSDFSGPNCGSTACVSVIRGNRLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEVEKDRIKKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQIVTADPDVTSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHGQLKTENKLSAVCEKVFDRCLAPTAGGEGCDNMTMILIQFKKLPTSDASVKDQPQPSAQPTPTPPIPDTSAQPSEAGRS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02260 367 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Car06g02260 367 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Car06g02260 367 Gene3D - 1 329 IPR036457 -
Car06g02260 367 MobiDBLite consensus disorder prediction 334 367 - -
Car06g02260 367 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Car06g02260 367 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Car06g02260 367 Pfam Protein phosphatase 2C 156 313 IPR001932 -
Car06g02260 367 SMART PP2C_4 13 326 IPR001932 -
Car06g02260 367 CDD PP2Cc 23 328 IPR001932 -
Car06g02260 367 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Car06g02260 367 SUPERFAMILY PP2C-like 3 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02260 Car-Chr6 23489382 23496945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02260 1 340 PP2C-type Phosphatase Gene Family AT2G25070 73.900 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02260 K17499 - gmx:100776787 648.662