Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02251 ATGGAAAAGTACGAAAAACTCGAAAAAGTTGGCGAAGGAACCTACGGAAAAGTATACAAAGCAAAAGAAATCTCGACAGGCCAAATCGTGGCACTAAAAAAAACCCGTCTCGAAATGGACGAAGAAGGTGTTCCACCAACAGCACTTCGCGAAGTTTCTCTTCTCCAAATGCTCTCTCAATCTCTCTACATCGTTCGTCTCCTCAACGTCGAACACGTCGATAAAACTTCCAAAACCACCGGGTCCCACACAAAACCTCTTCTCTATCTCGTCTTCGAGTATCTCGACACAGATCTGAAGAAATTCATCGATACTTTTCGTAAAGGAGTTAACCCTAGACCGTTACCGAATTCGCTTGTTCAGAGTTTTTTATTTCAGCTTTGTAAAGGTGTTGCTCATTGTCATAGTCATGGTGTTCTTCACCGTGATTTGAAACCGCAGAATTTGTTACTTGATCAACCGAAAGGGATTTTGAAGATCGCTGATCTTGGTCTTGGTCGTGCTTTTACTGTTCCTCTTAAGAGTTATACTCATGAGATTGTTACTCTTTGGTATAGAGCTCCTGAGGTTTTGCTTGGATCTACTACTTATTCTACTGGTGTTGATATTTGGTCCGTTGGATGTATCTTTGCTGAAATGGTGAGAAGGCAGGCTCTGTTTCCGGGGGATTCTGAATTCCAGCAGCTTCTTAACATATTCAAGCTTTTGGGGACTCCAACTGAGGAGCAGTGGCCAGGAGTTAGTTCTTTGCGGGATTGGCATGTCTACCCAAGATGGGAGCCTCAGAACTTGGCAAGGGCGGTGCCCTCCTTGGGACCTGATGGAGTGGACCTTCTCTCGAAAATGCTAAAGTACAACCCGGCTGAGAGAATTTCTGCCAAAGCTGCACTTGATCACCCCTACTTTGACAGTCTTGACAATTTATCTGTTGAGATTGAAAGTGATAGTTTGGAAGGCAAAAAAGAAAAGGCTACGCTATGCAGTCAAAGAATTAGTATACTAGTTTTATGGGGTCAGCCTTCTTTTCACATGCCATTGTTGATCACTCCGTGCATGTTTGTAACACTGATTTTGTTGATGCTTCAAAGTGCATTTTTTGCTAAAATCATGGTGGCAGGGTGTGATTACGCCAAATTCACAGTCAATTCAAGTATGCACTTGCTGCTAGTCTATGATTTGTGTACTTTGGTGAACTCAGTAACTGATTTGCAATTTCAATCAAGCACACTATGTTTGTTTTTGGGATTTAGAGTGTGTTATTGCTCATTTGTTGTTGAAATGTTTGACTTGTGA 1293 0.4215 MEKYEKLEKVGEGTYGKVYKAKEISTGQIVALKKTRLEMDEEGVPPTALREVSLLQMLSQSLYIVRLLNVEHVDKTSKTTGSHTKPLLYLVFEYLDTDLKKFIDTFRKGVNPRPLPNSLVQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQPKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTTYSTGVDIWSVGCIFAEMVRRQALFPGDSEFQQLLNIFKLLGTPTEEQWPGVSSLRDWHVYPRWEPQNLARAVPSLGPDGVDLLSKMLKYNPAERISAKAALDHPYFDSLDNLSVEIESDSLEGKKEKATLCSQRISILVLWGQPSFHMPLLITPCMFVTLILLMLQSAFFAKIMVAGCDYAKFTVNSSMHLLLVYDLCTLVNSVTDLQFQSSTLCLFLGFRVCYCSFVVEMFDL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02251 430 ProSiteProfiles Protein kinase domain profile. 4 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02251 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Car06g02251 430 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Car06g02251 430 PANTHER CYCLIN-DEPENDENT KINASE B1-2 1 307 - -
Car06g02251 430 SMART serkin_6 4 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02251 430 Gene3D Transferase(Phosphotransferase) domain 1 98 330 - -
Car06g02251 430 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Car06g02251 430 PANTHER CELL DIVISION PROTEIN KINASE 1 307 - -
Car06g02251 430 Pfam Protein kinase domain 4 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02251 430 SUPERFAMILY Protein kinase-like (PK-like) 1 306 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02251 Car-Chr6 23272531 23276505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02251 1 307 Core Cell Cycle Gene Families AT3G54180 83.062 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Car06g02251 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02251 K07760 - gmx:100805119 556.599