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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Car06g02240
ATGTCAAATCTATTAAGTGTCTCTGATCTCATTCCTTTGTTTCTCACCCCTTTTCCTTGCCGACCCATTTTCACTTACTCAACTCAACGTCACGTGCCTCCACATGCTTCTCTATTCTTTCTCAGATCAAGTAATTTTGGGTTTTCCTGTACCATGGATGGCATTCGTGGGGGAGATTCTCGGATGCAGATAAGCGACGGACAGCATCCTGTACATGTGCCTTATGAACATCATGGATTGCACCATATGAGCAATGGGAATGGGATGGACGATGATCACAACAATGGCCGTGATTCTAACTGCGGCGGAAGTGAGAGTGTGGAAGGTGACATCCCCTCCAACCATGGAAATCTCCATGACAATCACAATTTAATGATGGATCAAGGGAATGATATTGGGGATCAGCTTACTTTGTCTTTTCAGGGACAGGTTTATGTCTTTGATTCTGTGTCACCAGAAAAGGTTCAGTCTGTACTGCTGTTACTGGGAGGCCGTGAAATGCATCCAACCTTACCTTCCGTTCCAATTTCTCCTGACGAAAATAACCGGGGATTTATCGGTACTCCACAAAAATTCAGCGTCCCTCAGAGATTAGCTTCATTGAATAGATTTCGTGAAAAGCGGAAGGAACGAAATTTTGACAAAAAAATTCGTTATACCGTTCGCAAAGAAGTAGCATTAAGGATGCAAAGAAATAAAGGCCAGTTTACATCTTCCAAGTCCAATCATGATGAGTCAGCATCAGCTGCAATGAATGGCGGAACAAACGAAGGCTTGATTGCAGACAATAACGGATCCCAACAGCATGATATTGTTTGTAGACATTGTGGCATCAGTGAGAAGTGCACGCCAATGATGCGACGTGGACCTGAAGGGCCAAGAACCCTATGCAATGCTTGTGGACTTATGTGGGCAAATAAGGGAGCTCTTAGGGACCTATCAAGGGCAGCAACCTTGCCGGTGGCACATAATTCTCCATTAAACAAGAATGAGAATAAAAATTCAGAGACCAATCAGATAGTGCTTAGAGATGCTGCTGAATCATCATCATGA
1053
0.4378
MSNLLSVSDLIPLFLTPFPCRPIFTYSTQRHVPPHASLFFLRSSNFGFSCTMDGIRGGDSRMQISDGQHPVHVPYEHHGLHHMSNGNGMDDDHNNGRDSNCGGSESVEGDIPSNHGNLHDNHNLMMDQGNDIGDQLTLSFQGQVYVFDSVSPEKVQSVLLLLGGREMHPTLPSVPISPDENNRGFIGTPQKFSVPQRLASLNRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKSNHDESASAAMNGGTNEGLIADNNGSQQHDIVCRHCGISEKCTPMMRRGPEGPRTLCNACGLMWANKGALRDLSRAATLPVAHNSPLNKNENKNSETNQIVLRDAAESSS
350
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Car06g02240
350
ProSiteProfiles
GATA-type zinc finger domain profile.
267
323
IPR000679
GO:0006355|GO:0043565
Car06g02240
350
SMART
tify_2
129
164
IPR010399
-
Car06g02240
350
MobiDBLite
consensus disorder prediction
235
257
-
-
Car06g02240
350
ProSiteProfiles
Tify domain profile.
129
164
IPR010399
-
Car06g02240
350
ProSitePatterns
GATA-type zinc finger domain.
273
300
IPR000679
GO:0006355|GO:0043565
Car06g02240
350
PANTHER
GATA TRANSCRIPTION FACTOR 28
43
338
IPR045280
GO:0006355
Car06g02240
350
SUPERFAMILY
Glucocorticoid receptor-like (DNA-binding domain)
268
332
-
-
Car06g02240
350
Pfam
CCT motif
197
239
IPR010402
GO:0005515
Car06g02240
350
Pfam
GATA zinc finger
273
308
IPR000679
GO:0006355|GO:0043565
Car06g02240
350
MobiDBLite
consensus disorder prediction
77
126
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Car06g02240
Car-Chr6
23113391
23121935
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Car06g02240
52
346
Tify Gene Family
AT1G51600
63.423
2.87e-129
370
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-GATA
Car06g02240
CCT
3.2e-15
CL0281
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Car06g02240
-
-
gmx:100812262
484.182
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