Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02240 ATGTCAAATCTATTAAGTGTCTCTGATCTCATTCCTTTGTTTCTCACCCCTTTTCCTTGCCGACCCATTTTCACTTACTCAACTCAACGTCACGTGCCTCCACATGCTTCTCTATTCTTTCTCAGATCAAGTAATTTTGGGTTTTCCTGTACCATGGATGGCATTCGTGGGGGAGATTCTCGGATGCAGATAAGCGACGGACAGCATCCTGTACATGTGCCTTATGAACATCATGGATTGCACCATATGAGCAATGGGAATGGGATGGACGATGATCACAACAATGGCCGTGATTCTAACTGCGGCGGAAGTGAGAGTGTGGAAGGTGACATCCCCTCCAACCATGGAAATCTCCATGACAATCACAATTTAATGATGGATCAAGGGAATGATATTGGGGATCAGCTTACTTTGTCTTTTCAGGGACAGGTTTATGTCTTTGATTCTGTGTCACCAGAAAAGGTTCAGTCTGTACTGCTGTTACTGGGAGGCCGTGAAATGCATCCAACCTTACCTTCCGTTCCAATTTCTCCTGACGAAAATAACCGGGGATTTATCGGTACTCCACAAAAATTCAGCGTCCCTCAGAGATTAGCTTCATTGAATAGATTTCGTGAAAAGCGGAAGGAACGAAATTTTGACAAAAAAATTCGTTATACCGTTCGCAAAGAAGTAGCATTAAGGATGCAAAGAAATAAAGGCCAGTTTACATCTTCCAAGTCCAATCATGATGAGTCAGCATCAGCTGCAATGAATGGCGGAACAAACGAAGGCTTGATTGCAGACAATAACGGATCCCAACAGCATGATATTGTTTGTAGACATTGTGGCATCAGTGAGAAGTGCACGCCAATGATGCGACGTGGACCTGAAGGGCCAAGAACCCTATGCAATGCTTGTGGACTTATGTGGGCAAATAAGGGAGCTCTTAGGGACCTATCAAGGGCAGCAACCTTGCCGGTGGCACATAATTCTCCATTAAACAAGAATGAGAATAAAAATTCAGAGACCAATCAGATAGTGCTTAGAGATGCTGCTGAATCATCATCATGA 1053 0.4378 MSNLLSVSDLIPLFLTPFPCRPIFTYSTQRHVPPHASLFFLRSSNFGFSCTMDGIRGGDSRMQISDGQHPVHVPYEHHGLHHMSNGNGMDDDHNNGRDSNCGGSESVEGDIPSNHGNLHDNHNLMMDQGNDIGDQLTLSFQGQVYVFDSVSPEKVQSVLLLLGGREMHPTLPSVPISPDENNRGFIGTPQKFSVPQRLASLNRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKSNHDESASAAMNGGTNEGLIADNNGSQQHDIVCRHCGISEKCTPMMRRGPEGPRTLCNACGLMWANKGALRDLSRAATLPVAHNSPLNKNENKNSETNQIVLRDAAESSS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02240 350 ProSiteProfiles GATA-type zinc finger domain profile. 267 323 IPR000679 GO:0006355|GO:0043565
Car06g02240 350 SMART tify_2 129 164 IPR010399 -
Car06g02240 350 MobiDBLite consensus disorder prediction 235 257 - -
Car06g02240 350 ProSiteProfiles Tify domain profile. 129 164 IPR010399 -
Car06g02240 350 ProSitePatterns GATA-type zinc finger domain. 273 300 IPR000679 GO:0006355|GO:0043565
Car06g02240 350 PANTHER GATA TRANSCRIPTION FACTOR 28 43 338 IPR045280 GO:0006355
Car06g02240 350 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 268 332 - -
Car06g02240 350 Pfam CCT motif 197 239 IPR010402 GO:0005515
Car06g02240 350 Pfam GATA zinc finger 273 308 IPR000679 GO:0006355|GO:0043565
Car06g02240 350 MobiDBLite consensus disorder prediction 77 126 - -
Car06g02240 350 Gene3D - 268 317 IPR013088 GO:0006355|GO:0008270
Car06g02240 350 CDD ZnF_GATA 272 314 IPR000679 GO:0006355|GO:0043565
Car06g02240 350 ProSiteProfiles CCT domain profile. 197 239 IPR010402 GO:0005515
Car06g02240 350 PANTHER GATA TRANSCRIPTION FACTOR 24 43 338 - -
Car06g02240 350 MobiDBLite consensus disorder prediction 99 126 - -
Car06g02240 350 Pfam tify domain 135 163 IPR010399 -
Car06g02240 350 MobiDBLite consensus disorder prediction 77 98 - -
Car06g02240 350 SMART GATA_3 267 320 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02240 Car-Chr6 23113391 23121935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02240 52 346 Tify Gene Family AT1G51600 63.423 2.87e-129 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Car06g02240 CCT 3.2e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02240 - - gmx:100812262 484.182