Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02237 ATGGGTGAAGAGGCGAAATCAATTGTTCCAGAGTCTGTGTTGAAGAAGCAGAAAAGGGAAGAAGAATGGGCTTTGGCGAAAAAGCAAGAAAGTGAAGCTGCTAAGAAGAAGAGAGCTGAGAATCGTAAGCTGATTTACAGCAGAGCTAAGCAGTATTCTCAGGAATATGAGGAACAGGATAAGGAATTGATTCAATTGAAACGCGAGGCTAAGCTGAAAGGTGGATTCTATGTTGATCCAGAGGCTAAGCTCGTGTTTATTATCCGTATTCGTGGTATTAATGCCATGGACCCAAAGACAAGAAAGATTTTGCAACTGTTTCGGTTGAGACAGATTTTCAATGGTGTATTCCTCAAAGTTAACAAAGCAACAATGAACATGTTGCACAGGGTTGAGCCTTATGTGACTTATGGATACCCAAATTTGAAGAGTGTTAGGGAGCTCATTTACAAGAGAGGGTATGGAAAGCTAGACAGGCAGCGGATTGCTCTCACCGACAACTCCGTCATTGAGCAGGGTCTAGGAAAGCATGGAATCATATGCATCGAAGATCTTATCCACGAGATCTTGACAGTTGGACCACATTTTAAGGAGGCAAACAACTTCCTTTGGCCATTCAAGCTCAAGGCTCCATTGGGTGGCTTAAAGAAGAAGCGTAACCATTATGTTGAAGGAGGTGATGCTGGAAACCGTGAGAATTTCATCAATGAGCTAATCAGGAGGATGAATTAA 732 0.4249 MGEEAKSIVPESVLKKQKREEEWALAKKQESEAAKKKRAENRKLIYSRAKQYSQEYEEQDKELIQLKREAKLKGGFYVDPEAKLVFIIRIRGINAMDPKTRKILQLFRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDRQRIALTDNSVIEQGLGKHGIICIEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02237 243 Gene3D - 84 188 IPR036919 -
Car06g02237 243 Gene3D - 189 243 IPR036919 -
Car06g02237 243 Coils Coil 49 69 - -
Car06g02237 243 PANTHER 60S RIBOSOMAL PROTEIN L7-RELATED 6 243 - -
Car06g02237 243 SUPERFAMILY Ribosomal protein L30p/L7e 84 243 IPR036919 -
Car06g02237 243 ProSitePatterns Ribosomal protein L30 signature. 103 135 IPR018038 -
Car06g02237 243 TIGRFAM uL30_euk: 60S ribosomal protein uL30 10 243 IPR005998 GO:0000463|GO:0003735|GO:0022625
Car06g02237 243 PANTHER 60S RIBOSOMAL PROTEIN L7 6 243 IPR039699 -
Car06g02237 243 Pfam Ribosomal protein L30p/L7e 85 135 IPR016082 -
Car06g02237 243 CDD Ribosomal_L7_archeal_euk 84 243 IPR035808 -
Car06g02237 243 Pfam Ribosomal L30 N-terminal domain 9 80 IPR012988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02237 Car-Chr6 23083887 23086802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02237 4 243 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 85.833 6.79e-159 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02237 K02937 - zju:107428176 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02237 06 23083887 23086802 Car06g02237 06 23083887 23086802 ECH