Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02235 ATGTCCGGCATGATCCAGAATCTTCAGGAAAATTTACGAGCTGAGGCTGCCGATTGCGTGTATTTTGAAGCGAGTTTGCGTGTTAAGGATCCAGTTTATGGGTGTGTTGGAATAATCTCTCAATTGCAACAAGAGATAACCCAAACTCAAAACGACATAATAAAGATGAAGGGTGAAATAGCATTTCATCATGCTCAGAGACATCAGCTCCAACAAATGGCTCATGCTGATTATCAATGTGACCCAGCATCATTTACATATATGATTGAGACCTTTCTTTAA 282 0.3972 MSGMIQNLQENLRAEAADCVYFEASLRVKDPVYGCVGIISQLQQEITQTQNDIIKMKGEIAFHHAQRHQLQQMAHADYQCDPASFTYMIETFL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02235 93 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE ISOFORM X1 3 76 - -
Car06g02235 93 ProSiteProfiles LOB domain profile. 1 60 IPR004883 -
Car06g02235 93 Coils Coil 39 59 - -
Car06g02235 93 Pfam Lateral organ boundaries (LOB) domain 2 55 IPR004883 -
Car06g02235 93 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02235 Car-Chr6 23049963 23050244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02235 1 71 AS2 family AT3G26660 47.887 3.80e-17 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car06g02235 LOB 3.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02235 - - psom:113360631 88.9669