Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02230 ATGGCTATTCGTTTGCCTTTGATCATGCAGGCTAAGAAGCATATCCTCTGCAGCACACTTTCAAGCAGCAAAAAAGTGTCATCTGTTAATAtaccaaaaggttatttggcagtatatgttggagaagagaaaaagaagagatttgtggttccaatatcatacttgcatgaacctgcttttcaacaattgctttgtaaagctgaagaagaatttgggtttaatcatccaatgggtggtctcaccattccttgcagagaagaaatctttgttagtgttacttctcaattggaAGTTTAA 297 0.1279 MAIRLPLIMQAKKHILCSTLSSSKKVSSVNIPKGYLAVYVGEEKKKRFVVPISYLHEPAFQQLLCKAEEEFGFNHPMGGLTIPCREEIFVSVTSQLEV 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02230 98 PANTHER SMALL AUXIN-UP RNA-RELATED 16 97 - -
Car06g02230 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 16 97 IPR003676 GO:0009733
Car06g02230 98 Pfam Auxin responsive protein 12 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02230 Car-Chr6 22939789 22940659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02230 30 89 Calmodulin-binding Proteins AT3G43120 56.667 6.00e-17 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02230 06 22939789 22940659 Car06g02230 06 22939789 22940659 ECH