Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02220 ATGGAAGACGGTGAGCTTGATTTCTCGAACCATGAAGTGTTTTCGAGTCCAAACATGGGTGAATTTCCAAGTAGTGGTTCAATGGACAGTTTCTTTGATGAACTCTTGAAAGACTCACACGCTTGCACTCACACTCACACGTGTAACCCACCTGGTCCTGATTCTTCACACACTCACACGTGTTATCATGTTCACACCAAAATTGTGCCTGCACCTGAGGAAGATCAGATTGGTACTGATGATACTGCTGAGTCTGCTGAAAAGAAGTCTAAAAAACGTCCGACGGGTAATAAGGAAGCGGTTAGGAAGTACCGTGAGAAGAAGAAAGCTAGGGCTGCATCGTTGGAAGAAGAGGTTATGAAATTGAGGGCTTTGAATCAGCATTTGATGAGGAAGTTGCAGGGTCAGGCTGCTTTGGAGGCTGAAGTTGCTAGGTTGAAGTGTTTGTTGGTTGATATTAGGGGAAGGATTGAAGGAGAAATCGGATCGTTTCCATATCAGAAACCTACTAATGCTAATCCCGCGATTCCGAACTTGCCTGGTTCTTATGTGATGAACCCTTGTAACGTGCAGTGTGATGATCGGGTCTATTGCCTTCGTCCTGGAGCAGATGGGAATATTGCAGAAGGGGTGTCGCCTAATGGGGAAGGATTTGACGGTTGTGAGTTTGAGAGTCTTCAGTGTCTTGCGGGCCAAAATGTGGGGATTAAGGATCTTCATGGTTGTGGAGTTGGACAGACATTGTCTAATGTCAACCCCACAGCATCCATTAAAAGAAAAGGAAAATCTCGTGCAGCAAAAGCTGGTTGA 810 0.4543 MEDGELDFSNHEVFSSPNMGEFPSSGSMDSFFDELLKDSHACTHTHTCNPPGPDSSHTHTCYHVHTKIVPAPEEDQIGTDDTAESAEKKSKKRPTGNKEAVRKYREKKKARAASLEEEVMKLRALNQHLMRKLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKPTNANPAIPNLPGSYVMNPCNVQCDDRVYCLRPGADGNIAEGVSPNGEGFDGCEFESLQCLAGQNVGIKDLHGCGVGQTLSNVNPTASIKRKGKSRAAKAG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02220 269 Coils Coil 266 269 - -
Car06g02220 269 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700|GO:0006355
Car06g02220 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Car06g02220 269 PANTHER BASIC LEUCINE ZIPPER 23 1 239 - -
Car06g02220 269 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Car06g02220 269 MobiDBLite consensus disorder prediction 81 103 - -
Car06g02220 269 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Car06g02220 269 Coils Coil 98 132 - -
Car06g02220 269 MobiDBLite consensus disorder prediction 72 109 - -
Car06g02220 269 MobiDBLite consensus disorder prediction 11 25 - -
Car06g02220 269 MobiDBLite consensus disorder prediction 1 26 - -
Car06g02220 269 Gene3D - 78 153 - -
Car06g02220 269 CDD bZIP 97 144 - -
Car06g02220 269 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 239 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02220 1 268 bZIP Transcription Factor Family AT4G35040 62.963 2.20e-115 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car06g02220 bZIP_2 1.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02220 K25785 - gmx:780549 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02220 06 22797955 22800641 Car06g02220 06 22797955 22800641 ECH