Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02218 ATGACAGTTGAAAAGAGGTTTGTTTTGGTTGGGATTAGAATAGATAGCCATAGCAGAGAGCTTCTCAATTGGGCTCTTGTGAAAGTTGCTGAGCCTGGGGATTGTGTTCTTGCTGTACATGTACTTAAAACTAAAAGTTCAGATTGTATTTCCCAAAATAAGAGCCTCATGGATGGCTATTTAGAGGTTTATAAAGGCTTGTGTCATGCAAAGAAGGTTGGTCTTTCTGGTCAAATCATAACAGGAAGGTCCATTAAAAACATTCTTGTTAGAGAAGCAAAAAACCATCATGCTCTGTCTCTAGTGGTGGGGGGTCGAGCTTCCACAGCTAAATATTGCGCCAAACGACTTCCACCCACCACCAATGTTCTAGCCATCCGAGATTCAAGAGTTGTTTTCAGGAGGTGCACCAATAAACAACCACCAGGTAGTCTTATATTGGATCCAAGACCAAGTTTAACAAGCATAGATAACCTGAGTGACAGAACAATCCAGTCAGAATTTGGTTGCTCCACGGAGGAAGAAGAAAAATCACTATGCCAAAATACCAAAGAATTGAAAGAAGAAACAATTGACGAATCAGAAAGGTACAAGTCAAGGTTGATATCTATTTTTGCAGGCAAAGCTTCTAAGCAGAAGCTTGGATGGCCTCTACTCCGCAGAGCGACTTCAGAAATCTCACAAAGGCCTCATGGAAGAAGGGACATGTCAGTAGTACAATGGGTAATGAGCTTACCGGACCGTTCACCACATAGTAGTCCTCAATCATCTTCCCCTGATGAAAACCCATTCGAAAGGAGCATCAGTGACATTGAGGATGAAAGCTTCAAAAATTATTTACTTCCATCTGTTGTACTACCAAAAGGCCTAGAAGGGATATTAAATGTAAATTCACTCAATTGCATGTGGTTTAGCCTTGAGGCTCTCAAATCTTGCACTAGCCAATTCTCTTCAGAAAACTTGATTGGGAAAGGAGGGAGCAACCGTGTGTATAAAGGAGTTCTCTCTGATGGAAAGCCAATTGCAGTTAAAGTATTGCAGTCATCAAAAGAAGCCTGGAAAGATTTTTCTTTTGAGATAGAAATAATATCCTCATTGAAGCACAAAAACATTTCTCAACTACTTGGGATTTGCATAGAGGACAATACTTTAATATCTGTTTATGATTATTTCCCCAAAGGCAGCTTAGAGCAAAATCTACATGGAAAGAACAAGGATGAATCCTTTTTGTCATGGGAAGTGAGATTTAATGTAGCTGTTGGAATAGCTGAGGCCCTAGATTACCTACACACAGAAGCTTTGAAGCCTGTTATACATAGAGATGTCAAGTCTTCAAACATTCTTCTTTCCGAGGGGTTTGAACCACAATTGTCTGATTTTGGACTTGCAATATGGGGACCAACAACAACATCCTTTTTGACACAAGAAGATTTGGTAGGAACATTTGGTTACCTTGCTCCTGAATACTTCATGTATGGAAAAGTCAGTGAAAAAATAGATGTGTATGCCTTTGGTGTAGTACTACTTGAGCTAATATCAGGTAGGGAGCCAATTAGCTCTGAACCTTGCAAAGGACAGGAGAGCTTGGTTGTTTGGGCAAAACCAATAATAGAGAATGGGGATATTAAAGATTTGTTGGACCCAAAATTAGAAGGGAACTTTGATGAGACCCAAATGCAAAGAATGGTTTTGGCAGCATCTTTATGCATCACAAGAGCTGCTAGACTTCGTCCTAAATTAAAACAGATACTGAAGATCCTAAAAGGAGATAATGAAGTTGAATATTGCTTCAATGAGCATTCAGACAATGAAGAAAACATTGATGACGAAGTGTATCCAAATTCAAGTGCAGAGTTACACCTAAGTCTTGCATTACTTGGTGTTGATGATGACACTACATCATGTAGTAGTACAGACCACAGCTATAGTGAATACTTGAAAGACCAATGGAGCAGGTCTTCCAGTTTTAATTAG 1974 0.3951 MTVEKRFVLVGIRIDSHSRELLNWALVKVAEPGDCVLAVHVLKTKSSDCISQNKSLMDGYLEVYKGLCHAKKVGLSGQIITGRSIKNILVREAKNHHALSLVVGGRASTAKYCAKRLPPTTNVLAIRDSRVVFRRCTNKQPPGSLILDPRPSLTSIDNLSDRTIQSEFGCSTEEEEKSLCQNTKELKEETIDESERYKSRLISIFAGKASKQKLGWPLLRRATSEISQRPHGRRDMSVVQWVMSLPDRSPHSSPQSSSPDENPFERSISDIEDESFKNYLLPSVVLPKGLEGILNVNSLNCMWFSLEALKSCTSQFSSENLIGKGGSNRVYKGVLSDGKPIAVKVLQSSKEAWKDFSFEIEIISSLKHKNISQLLGICIEDNTLISVYDYFPKGSLEQNLHGKNKDESFLSWEVRFNVAVGIAEALDYLHTEALKPVIHRDVKSSNILLSEGFEPQLSDFGLAIWGPTTTSFLTQEDLVGTFGYLAPEYFMYGKVSEKIDVYAFGVVLLELISGREPISSEPCKGQESLVVWAKPIIENGDIKDLLDPKLEGNFDETQMQRMVLAASLCITRAARLRPKLKQILKILKGDNEVEYCFNEHSDNEENIDDEVYPNSSAELHLSLALLGVDDDTTSCSSTDHSYSEYLKDQWSRSSSFN 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02218 657 Gene3D Phosphorylase Kinase; domain 1 291 390 - -
Car06g02218 657 PANTHER OS08G0249100 PROTEIN 3 636 - -
Car06g02218 657 Pfam Protein kinase domain 317 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02218 657 CDD USP_Like 8 118 - -
Car06g02218 657 MobiDBLite consensus disorder prediction 246 266 - -
Car06g02218 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Car06g02218 657 MobiDBLite consensus disorder prediction 246 264 - -
Car06g02218 657 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 3 636 - -
Car06g02218 657 ProSiteProfiles Protein kinase domain profile. 316 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02218 657 SUPERFAMILY Protein kinase-like (PK-like) 297 587 IPR011009 -
Car06g02218 657 Gene3D Transferase(Phosphotransferase) domain 1 391 604 - -
Car06g02218 657 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 127 - -
Car06g02218 657 SMART serkin_6 316 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02218 Car-Chr6 22789658 22794268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02218 303 652 Trihelix Transcription Factor Family AT5G38560 39.607 1.13e-76 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Car06g02218 Pkinase 3.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02218 - - gmx:100789189 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02218 06 22789658 22794268 Car06g02218 06 22789658 22794268 ECH