Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02204 ATGCGCAGAGAGATCGCGTTTCTCGCTCAACCGCGATTCCTCCTTATCTTCCTTGTTCTCTCAATTTTCCTCATTTTCGCATTCTCTGCTTCTAAACGGGCCGATGAAGAATCAGAAGAGGAGCCCGAAATTACACATAGAGTTTTCTTGGATATTGATATCGATAAACAGCGCTTAGGTAGGATCGTGATTGGATTATATGGCCAAGCGGTACCAAAAACTGTGGAAAATTTTAGAGCTTTGTGCACAGGGGAGAAAGGAGAGAGTGCAAGTGGTGTAAAACTTCATTACAAAGGAACACCATTTCATCGGATAATATCTGGTTTTGTGATTCAGGGTGGAGATATTATTCAGCATGACGGCAAAGCATCCGAATCTATTTATGGTGGCACCTTCCCTGACGAGAATTTCAGGATTAAACATTCTCATGCTGGTGTTGTCTCTATGGCAAATTCAGGACCTGATTCCAATGGTTCACAGTTTTTCATCACCACAGTGAAGGCCAGTTGGTTGGATGGAGACCATGTTGTTTTTGGCAAGGTTGTTGAAGGCATGGATACCGTGTTTGCAATTGAAGGAGGGGCTGGAACCTATAGCGGAAAACCCAGGAAGAAGGTAGTGATTGCGGACTCTGGAGAGATACCAAAGGGTAGGTGGGACGAGGAAAGTTGA 672 0.4435 MRREIAFLAQPRFLLIFLVLSIFLIFAFSASKRADEESEEEPEITHRVFLDIDIDKQRLGRIVIGLYGQAVPKTVENFRALCTGEKGESASGVKLHYKGTPFHRIISGFVIQGGDIIQHDGKASESIYGGTFPDENFRIKHSHAGVVSMANSGPDSNGSQFFITTVKASWLDGDHVVFGKVVEGMDTVFAIEGGAGTYSGKPRKKVVIADSGEIPKGRWDEES 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02204 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 223 - -
Car06g02204 223 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 52 211 IPR002130 GO:0000413|GO:0003755
Car06g02204 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 81 IPR002130 GO:0000413|GO:0003755
Car06g02204 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 114 IPR002130 GO:0000413|GO:0003755
Car06g02204 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 IPR002130 GO:0000413|GO:0003755
Car06g02204 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 172 IPR002130 GO:0000413|GO:0003755
Car06g02204 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 188 IPR002130 GO:0000413|GO:0003755
Car06g02204 223 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 49 213 IPR002130 GO:0000413|GO:0003755
Car06g02204 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 223 - -
Car06g02204 223 Gene3D - 33 218 IPR029000 -
Car06g02204 223 SUPERFAMILY Cyclophilin-like 44 214 IPR029000 -
Car06g02204 223 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 97 114 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02204 Car-Chr6 22586080 22590120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02204 60 211 U-box Gene Family AT5G67530 43.137 4.80e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02204 - - gmx:100800775 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02204 06 22586080 22590120 Car06g02204 06 22586080 22590120 ECH