Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02196 ATGAAAAAGTCTATTCTACGATTATCAAAAACACAAAGAGTGTTGGATTATGCCGAAACAATTCGTATTCCTGAAAGAAGGAGAGAATTGGAATCAAATGGATTGGCTAGGAGGGAACAACCTAATGCATGGTCTAGGAGGGAACAACCTTATAATGCATGGTCTAGGAGGGAACAACCTTATACACGTGATCATCAGCAAGAGTTTAATGTATCTTTTGTTACAAGAATGGAGATTGCTAGGTGGGCAATGAAAGCGTTGCCTCCGATTAAAAGCTTCATTAGAGATGAATCTATCGAATGTCCGATTTGCATAGAAGAATTCAAGAAAGGTGAGTTGATTCAATGTTTTGGAAAGTGTGGCCATGAATTTCATGCCTCTTGTCTCAATTCTTGGTTACTTGGAGGAAAAACTACTTGTCCGGTATGTCGAGAAGATTTGTTAACAACTACATAG 456 0.3838 MKKSILRLSKTQRVLDYAETIRIPERRRELESNGLARREQPNAWSRREQPYNAWSRREQPYTRDHQQEFNVSFVTRMEIARWAMKALPPIKSFIRDESIECPICIEEFKKGELIQCFGKCGHEFHASCLNSWLLGGKTTCPVCREDLLTTT 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02196 151 Pfam Ring finger domain 100 144 IPR001841 -
Car06g02196 151 SMART ring_2 101 143 IPR001841 -
Car06g02196 151 CDD RING-H2 101 144 - -
Car06g02196 151 ProSiteProfiles Zinc finger RING-type profile. 101 144 IPR001841 -
Car06g02196 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 149 IPR013083 -
Car06g02196 151 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 63 147 - -
Car06g02196 151 SUPERFAMILY RING/U-box 92 149 - -
Car06g02196 151 PANTHER OS06G0666500 PROTEIN 63 147 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02196 53 150 C3H Transcription Factor Family AT1G76410 31.373 1.41e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02196 - K15692 mtr:MTR_4g073810 147.902