Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02193 ATGGCGGATAGCGTGGTTGCGTTTCTTTTGGAACACTTATCCCAATTACTACAACGCGAAACTAATTTACTCTGTGGAGTGGAAGACCAAATCACATCTCTTCGCAACGAACTCCAAATCATAAACATCTACCTCAAAACATCCTCCGGAAACAATAACAACAACAAAGAGATGGAACAACTAATTCTGAGTCAGATCAGAGACATAGCACACGTAGCTGAGGATGTCATCGACACATTCATCGCCAACGTCGCCGTCTACAAGAGAAAAAACTTGCTTAAAAGAATGCTTCACAGCGTTGGCCACGCTAAATTGCTCCACGATGTAGCAGAGAAAATTGACAAGATCAAAAACACTCTCAAAGAGATAAATGAAAACAAGATCAAATACTATCAAGATAGTAGTGATCAAACAAGAGAAGATGGGATGAAGATGCAATCACTTCACATATTAAGAAGCAACGTTGAAGTGAAAGATGTAGTTGGCTTTGTCCATGAATCTGAGGTTGTTATCAATAGACTCATCGGAGAAGGTTCGTTGCATCTCAACGTTGTTTCAATTATTGGTATGGGTGGATTGGGTAAGACGACACTTGCACGAAAGATCTATAACAGCGACAAGGTGAAGAAACACTTCAATTGTCTCGCATGGGTTTATGTTTCAAATGAGTGTAGAACTAAGGAGATTTTGCTTGGTCTTCTTAAACATTTGATGCCAAACCATGAATATGAAGGTAGAAGGAACAACAACACTAAGAAGGGTAAGAAGAAACACAAGGAGTTAGCTCAAGATTTGAGTAGCTTGAGTGAGGGTGAGATGAAGGAAACTATAAGAAAATGTTTGGAGTTGAAAAAGTATTTGTTGGTTCTCGATGACTTGTGGAATAGGCAAGATTGGGATGCGGTAAAAGACGCTTTTCCTGATGGCAACAAAGGAAGCAGAGTATTGATAACCAGTCGTTTGAAAGAAATAGCTTCTCATACTAGTCGAGATCCTCCTTACTACCTTCAATTTCTTAGTGAACAAAAAAGTTGGGAGCTTTTCTCTAAAAAAGTGTGTAGAGGAGAAGATTACCCTTGTGGTCTTGAATCTCTTGGTAAACAAATGGTTAAAAGTTGTGGCGGGTTGCCACTCTCAATTGTGGTGCTGGCAGGACTTTTGGCAAACAAGATAAAGTCACATAGAGAATGGTCCAAAGTTGTGGGTCATGTCAACTGGTATCTTACTCAAAACGAGACTCAAGTAAAGGATGTCATACTTAAACTCAGTTTTGACAACTTGCCTTCAAGGTTGAAACCATGTTTTTTGTATCTAGGTATATTTCCTGAAGATCATGAAATATGTGTGAGGCAATTGTTGCAACTATGGGTTGCTGAAGGATTTATACAAGAAACAGGGTCAGGGAGTAGAGATTTAGAAGATGTTGCTGAAGACTACTTGTACGAGCTCATCGATCGTAGTTTAATCCAAGTAGCAGGAGTAAGTGATAGTGGAGGCGTGGAAACATGTCGCATCCATGATCTTCTTAGAGATCTTTGTATACTAGAGAGTAAAGAGGACAAGATCTTTCAAGTTTGCAATGATAACAACATTCTAATCCCCACAAAACCTCGTAGATTGTCCATCCATTCTACTATGTCTCATTATGTTACTTCGAGCACCATTGACCATTCGTGTGTTCGTTCTTTGTTTTTCTCTGACCCGAACTGCTACATTTCTTACAAAGAGTGGATATGGCTTACCAAAGCCTTCAAATTGGTCCGTGTGTTAAATCTTGAGGGAAATTGTTGTCTTAAGATTCCTTCCAACCTGGGAAACTTCATCCACTTGAGGTACTTACGAATAAACTCACAATATACTAGATTTGTTCCTGATTCAATATCCAACCTTCAAAATCTAGAAATATTAGATTTCGGACCTTCAATTATGGTAATTTCAATTTCTTTCCCAAATGGAATATCAAAGCTAAAACATCTAAGACATGTATATACTTATGGGCCTATCATGCTACGTGGTCATAATTCAAAATCAGATGGTGAAGTTATGTGGAATCTTCAAACCATCTCTCGCATTGTACTCAATAAACAAACAACACATCACATAAAGAAAGGAAGTTTCCCGAAACTAAAAAAATTAGGGCTGCTTATCTCCTCAAACTTCAAGGGTGATGTGCCCAAAATGTTGCTAAGTCTAAAACAATTGAGCCATTTAAATAAGTTACAAATCATATTCAAAGTGAAAAATTGGCAACATAAACAATGGGATATCACTTGTAATCCTGAGGAAGTGTTACAAATTCTGAAGCACTTAAGGCAATTGAGTATACTAGAAATTATCAATTCCTTCAACCTTACAACACGTGTAATAATGTTTCCTCCCAACATTACCAAGTTAAAATTGACATGTATTAGTTGCTTGAATAGTGATGCGGTGAATGCTATTGGAAATCTAACCAAACTCCAAATTTTGATCTTATTTGGAGCCAAATGGTTTTCAAAACCTTGGACTTCAGATAAACTTTTTGATCTTAATTGTGTTGAAGATAGATTTCCATCGTTGCAAGTTTTTGAAATGAGATCTTTGCCTATTCAAAATTGGAAATTAGCCAATGGTTCGATGACACAACTTCAAACCCTCAATATTTGGAAATGTGATATGTTGGATAGCCTACCAAGTGAACTATGGTCTTTGACTACCTTAAGAAAAATATTTGTACAAGAGCCTTCAAATGCAATGACTGCATTTCTACAAAATTTGGAAGTTAAGAATGGACCTGATCTAATTGTAGAATAA 2793 0.3727 MADSVVAFLLEHLSQLLQRETNLLCGVEDQITSLRNELQIINIYLKTSSGNNNNNKEMEQLILSQIRDIAHVAEDVIDTFIANVAVYKRKNLLKRMLHSVGHAKLLHDVAEKIDKIKNTLKEINENKIKYYQDSSDQTREDGMKMQSLHILRSNVEVKDVVGFVHESEVVINRLIGEGSLHLNVVSIIGMGGLGKTTLARKIYNSDKVKKHFNCLAWVYVSNECRTKEILLGLLKHLMPNHEYEGRRNNNTKKGKKKHKELAQDLSSLSEGEMKETIRKCLELKKYLLVLDDLWNRQDWDAVKDAFPDGNKGSRVLITSRLKEIASHTSRDPPYYLQFLSEQKSWELFSKKVCRGEDYPCGLESLGKQMVKSCGGLPLSIVVLAGLLANKIKSHREWSKVVGHVNWYLTQNETQVKDVILKLSFDNLPSRLKPCFLYLGIFPEDHEICVRQLLQLWVAEGFIQETGSGSRDLEDVAEDYLYELIDRSLIQVAGVSDSGGVETCRIHDLLRDLCILESKEDKIFQVCNDNNILIPTKPRRLSIHSTMSHYVTSSTIDHSCVRSLFFSDPNCYISYKEWIWLTKAFKLVRVLNLEGNCCLKIPSNLGNFIHLRYLRINSQYTRFVPDSISNLQNLEILDFGPSIMVISISFPNGISKLKHLRHVYTYGPIMLRGHNSKSDGEVMWNLQTISRIVLNKQTTHHIKKGSFPKLKKLGLLISSNFKGDVPKMLLSLKQLSHLNKLQIIFKVKNWQHKQWDITCNPEEVLQILKHLRQLSILEIINSFNLTTRVIMFPPNITKLKLTCISCLNSDAVNAIGNLTKLQILILFGAKWFSKPWTSDKLFDLNCVEDRFPSLQVFEMRSLPIQNWKLANGSMTQLQTLNIWKCDMLDSLPSELWSLTTLRKIFVQEPSNAMTAFLQNLEVKNGPDLIVE 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02193 930 PRINTS Disease resistance protein signature 184 199 - -
Car06g02193 930 PRINTS Disease resistance protein signature 373 387 - -
Car06g02193 930 PRINTS Disease resistance protein signature 871 887 - -
Car06g02193 930 Gene3D Ribonuclease Inhibitor 525 925 IPR032675 -
Car06g02193 930 PANTHER DISEASE RESISTANCE PROTEIN RP 48 923 IPR044974 GO:0006952
Car06g02193 930 PANTHER - 48 923 - -
Car06g02193 930 Coils Coil 106 133 - -
Car06g02193 930 SUPERFAMILY L domain-like 504 906 - -
Car06g02193 930 CDD RX-CC_like 2 125 IPR038005 -
Car06g02193 930 Gene3D - 5 110 - -
Car06g02193 930 Pfam NB-ARC domain 168 425 IPR002182 GO:0043531
Car06g02193 930 Gene3D - 338 423 IPR042197 -
Car06g02193 930 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 438 IPR027417 -
Car06g02193 930 Gene3D - 424 515 IPR036388 -
Car06g02193 930 Pfam Rx N-terminal domain 5 85 IPR041118 -
Car06g02193 930 Gene3D - 143 331 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02193 Car-Chr6 22410856 22413981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02193 171 512 WRKY Transcription Factor Family AT5G45050 23.392 5.23e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02193 - - gmx:100814688 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02193 06 22410856 22413981 Car06g02193 06 22410856 22413981 ECH