Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02185 ATGAAGAGACTCTCATTTTCCTCTCTATTTTTCATCATCTATATATTTTATCTCTTCTTGTTTCTTCAACTAGTTAGTTCACAAGACGATTCACAACCACTTCTAGCACTCAAATCCTCCATTGATGTTCATAACAAGCTTCCATGGCTACAACAAGGAAACGACGTGTGCACTTGGTTAGGAGTCAGAGATTGTTTCAAAGGAAAAGTTAGAAAGCTAGTACTTGAATTTTTCAACTTAACAGGAACATTAGATTCAAACATTTTGACCCGTTTAGATCAACTTCGAGTTCTTAGTTTCAAAGGTAACTCACTCTCTGGTCAAATCCCTAACCTCTCTTCTCTCGTCAACCTCAAATCTATTTACCTTAACGATAACAATTTCTCCGGCGAGTTTCCGGCTTCTGTTTCCACTCTCCACCGAGTTAAAGTCATTGTTATTTCCGGTAATAGAATATCCGGCGAGATTCCGGCGTCGTTGCTTAAGCTTCCTCGGCTCTATGTTCTCTACTTGCAAGACAATTTGTTCACCGGTTCGATACCTGGTTTCAACCAAACAGGGCTTAAGTACTTGAATGTCTCGAATAACAAACTCTCCGGCGAGATTCCGGTGACGCCTGCATTGATCCGATTCAATGCGTCGTCGTTTTCGGGAAACTTAGGGTTATGCGGAGAACAGATCCACCGTGAATGCATAAGCAGTACTCTGTTACCGCCAACGGCGCCGTCGATGGGTCCAGTTGGAGGGAACGGTAAAACGACGTCGTCGAAATCGAACCGTACCAAAATTATGAAGATAATTGGAGGGAGTGTTGGTGGGTTTGTGTTGTTGTTGATATGCTTGATAATTTTGTTGTGGGTAATTTGTAAGAACCGTAGGAAGAGAGTGGGTTCgagtaggagcaagggtggtgacgtggcggaaggagaaaatgcggtaggaggaggtggagtaggaggagaaggagagggtaggggaAGTAATTATGATCGAAATCAAGGGGGTTTTGCTTGGGAAAGTGAAGGTATAGGGAAACTGGTGTTCTGCGGAGCAGGGGATCGAGAAATGGGTTACAGTTTGGAGGATTTACTGAAGGCTTCAGCTGAGACATTAGGGAGGGGTATTATGGGAAGTACGTATAAAGCAGTCATGGAATCAGGCTTCATTGTTACAGTTAAAAGGTTGAAAGATGCTAGGTACCCTGCGTTAGAGGAATTTAGGGCACATATAGAATTACTTGGTAAGCTTAGACACCCTAATTTGGTCCCACTTAGGGCTTACTTCCAAGCTAAAGAAGAACGTCTTCTTGTCTATGATTACTTTCCCAATGGCAGCCTCTTCTCTCTTATTCATGGATCAAAAACATCTAGTGGGGGAAAGCCTCTTCACTGGACATCTTGTCTTAAAATAGCAGAAGATTTAGCAACAGGCCTTCTCTATATCCACCAAAACCCCGGCTTGACACACGGAAACCTTAAATCTTCTAATGTGTTACTTGGTGCTGACTTTGAGTCCTGTCTCACTGATTATGGTCTCACCGTCTTCCTCAATCCCGACTCAATGGACGAACCAAGTGCCACTTCTTTCTTCTATAGAGCGCCCGAGTGCCGCAGTTTTCACAGGTCGCAAACTCAAACTGCTGATGTATACAGCTTTGGTGTCCTTCTCCTTGAGCTTTTGACAGGCAAAACACCCTACCAAGACCTTGTTCAGGCGCACGGTTCGGATATACCTAGATGGGTTCGGTCGGTGCGCGAAGAAGAGACTGAGTCCGGGGACGATCCTGCCTCATCGGGCAATGAATCATCTGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGGCATGTGTCTCACTTGTGCCAGAGAATCGACCTACAATGAGAGAAGTTCTAAAGATGATTAGAGATGCAAGAGGGGAAGCTCATGTTTCATCTAATAATAGTAGTGATCATTCACCTGGTAGATGGTCGGATACTGTTCAAAGCTTGCCAAGGGAAGAACATCTTAGCATATGA 2019 0.4185 MKRLSFSSLFFIIYIFYLFLFLQLVSSQDDSQPLLALKSSIDVHNKLPWLQQGNDVCTWLGVRDCFKGKVRKLVLEFFNLTGTLDSNILTRLDQLRVLSFKGNSLSGQIPNLSSLVNLKSIYLNDNNFSGEFPASVSTLHRVKVIVISGNRISGEIPASLLKLPRLYVLYLQDNLFTGSIPGFNQTGLKYLNVSNNKLSGEIPVTPALIRFNASSFSGNLGLCGEQIHRECISSTLLPPTAPSMGPVGGNGKTTSSKSNRTKIMKIIGGSVGGFVLLLICLIILLWVICKNRRKRVGSSRSKGGDVAEGENAVGGGGVGGEGEGRGSNYDRNQGGFAWESEGIGKLVFCGAGDREMGYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPALEEFRAHIELLGKLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSSGGKPLHWTSCLKIAEDLATGLLYIHQNPGLTHGNLKSSNVLLGADFESCLTDYGLTVFLNPDSMDEPSATSFFYRAPECRSFHRSQTQTADVYSFGVLLLELLTGKTPYQDLVQAHGSDIPRWVRSVREEETESGDDPASSGNESSEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNNSSDHSPGRWSDTVQSLPREEHLSI 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02185 672 Pfam Protein kinase domain 368 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02185 672 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Car06g02185 672 Gene3D Ribonuclease Inhibitor 185 234 IPR032675 -
Car06g02185 672 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Car06g02185 672 MobiDBLite consensus disorder prediction 584 604 - -
Car06g02185 672 SUPERFAMILY L domain-like 54 223 - -
Car06g02185 672 MobiDBLite consensus disorder prediction 296 326 - -
Car06g02185 672 MobiDBLite consensus disorder prediction 642 672 - -
Car06g02185 672 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 662 - -
Car06g02185 672 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 662 - -
Car06g02185 672 ProSiteProfiles Protein kinase domain profile. 365 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02185 672 SUPERFAMILY Protein kinase-like (PK-like) 369 644 IPR011009 -
Car06g02185 672 Gene3D Transferase(Phosphotransferase) domain 1 441 660 - -
Car06g02185 672 Gene3D Phosphorylase Kinase; domain 1 352 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02185 Car-Chr6 22317619 22324150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02185 5 672 Receptor kinase-like Gene Family AT1G60630 60.417 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car06g02185 Pkinase 2.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02185 - - lja:Lj3g3v3500180.1 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02185 06 22317619 22324150 Car06g02185 06 22317619 22324150 ECH