Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02175 ATGGTGGTGATCATGCAAGAGCAACAACAACAACAGCAGAATCCCTCTGTACTGTTGCCACAACTCACCACCACCAATCCCCAATCTTCCTCAACCGCCACCTCCCTTAGGTCACCCTCCTCCACCTCCGCTGCTGCTACCGCCACCCAATCTCACCTTTATTCGCCTATTCACATCGCTTCCCACCGCTTACCCCAATTCCAATCACTTCCGTCGCCTGTCGCGGCGGGTCTCCCGTCTGGGGAGCCGGTTTCGACGGCGCCGCCTACTTTTCAGTTGGCGAGGGTTCGGCTGTCGGACATTGCTCCTTATGACGGTGCACCGGCGGTGTCCTATGTTAGGGCAATGGAAACACTGTGTTCGTCTCTGTTGAAGCATAATGCGGCGTTGATTGAATTAGGGAGTGAAGATACTTCTCTGATGCGATGTGGATTGGAAGGTGCTAGATTGTTCTTCAGGAGTAGGGCACATCTTGGCGTTGGGAAGGGAAGCCGTGGGGTTTACATGTATAGGGCAGGAAGGGCTTTGGAGGATTGGGATTCATCTCCTCCTTGCATGGCTGATATTTTTAGGTGTATGGGAAAGGCTTCTCGTGTTGCTTTGTCTGCCATTGCAAGGCATCTGCGCCTGAGAAGCGATGTTTTTAACCAATTGCTTGATGATGCTCCATTGCCTGCAAACGAGGTGTCTTCTTCTGTTCTTGTTGGGACCTACTCACATGCTTCTTTGCAAAATGGAAAAGGTGTCATAGGAGGCGGTAAACCTACCGTCAATGGTGAAGTTGAGAAGGGGTTGTTGACATTGATATCTTCTGACACTCCTGGTTTTCAGGTATGTGACCCCAATGGCCGCTGGTATCTGGCAGACAGTGGGTCTGGGCCTGGAGATCTTTTACTTATAACAGGCCGGGCGCTTAGCCATGCTACTGCAGGCCTACATCCAGCTGCATCATATAGAGCTTCGCCAGATTGTTTTTTGAGTCCTAATAGTGGTGGAAGGACTTTACTTGCATATAGACTCATGCCACAGGGCAATGCTATATTAGATTCTTCTCCAATTGCAGCAGCTGGTCATGTTATTCCTCAAAGCTATGTTCCAATATCTGTAAGCCAATTTATGGACGACCTTGCTGCTGAAGAACTGATAGGTAGCAGATGTGATAATGATGATGTTGCTCAAAGCAATGTGAACAAGGATCCATCACTAAGAAGTGTTCTATCAGATCCTTTGTCTGGCTCATTCCTGGAAGATGCAATGCTTGTCTCATGTGGACATTCCTTTGGCGGTCTCACACTGAGGAGAGTCATTGAAACATCAAGATGCAGCCTCTGCAATGCTGATGTTGAGACCGGTTCTCTGATCCCTAATCTTGCTCTTAGAGCTGCAGCTGCTGCTGTCAAACATGAGGATGACCGAAGGCTATTTCGTAATGCTGCTCTTCGAAAGCGGCGGAAAGAAATGGGTGAACAAATTGATCCAATCAGAAGAGTGAACAGGGAAAATGGAGATTTTACTTCTGCTGATGGACTCCAGCGGAGAGTACAATATCCATTTTCAGTAAATGAGAAGGTTATTATTAAGGGTAACAGGAGAACACCCGAAAAATTTGTTGGAAAAGAAGCTGTCATTACGTCTCAGTGTCTGAATGGCTGGTATTTGCTCAAGATTATTGGAACTGGAGAGAATGTCCGCCTGCAATATCGTTCTCTCAGGAAGCTCTTAAACTCACCAGCCATGGAGGACCCGTGTCAGCTGCAGCCAGTTCAAAATAACAGCTCTTAA 1782 0.4781 MVVIMQEQQQQQQNPSVLLPQLTTTNPQSSSTATSLRSPSSTSAAATATQSHLYSPIHIASHRLPQFQSLPSPVAAGLPSGEPVSTAPPTFQLARVRLSDIAPYDGAPAVSYVRAMETLCSSLLKHNAALIELGSEDTSLMRCGLEGARLFFRSRAHLGVGKGSRGVYMYRAGRALEDWDSSPPCMADIFRCMGKASRVALSAIARHLRLRSDVFNQLLDDAPLPANEVSSSVLVGTYSHASLQNGKGVIGGGKPTVNGEVEKGLLTLISSDTPGFQVCDPNGRWYLADSGSGPGDLLLITGRALSHATAGLHPAASYRASPDCFLSPNSGGRTLLAYRLMPQGNAILDSSPIAAAGHVIPQSYVPISVSQFMDDLAAEELIGSRCDNDDVAQSNVNKDPSLRSVLSDPLSGSFLEDAMLVSCGHSFGGLTLRRVIETSRCSLCNADVETGSLIPNLALRAAAAAVKHEDDRRLFRNAALRKRRKEMGEQIDPIRRVNRENGDFTSADGLQRRVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLLNSPAMEDPCQLQPVQNNSS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02175 593 Gene3D - 166 381 IPR027443 -
Car06g02175 593 SUPERFAMILY Clavaminate synthase-like 181 349 - -
Car06g02175 593 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 85 591 - -
Car06g02175 593 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 400 470 IPR013083 -
Car06g02175 593 MobiDBLite consensus disorder prediction 1 47 - -
Car06g02175 593 SUPERFAMILY RING/U-box 402 468 - -
Car06g02175 593 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 85 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02175 Car-Chr6 22229266 22237829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02175 402 582 Plant U-box Gene Family AT5G05230 43.169 1.41e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02175 - - adu:107477161 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02175 06 22229266 22237829 Car06g02175 06 22229266 22237829 ECH