Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02136 ATGGGTTTATGTTCATTAATAAATTTGAATAttgttgttgttgttattgtggttctttgttgGAGTAAAGAAGTTTTAGGTGTGACACAACAAGAAGAGGACAGAGTGTATGAATTACCTGGGCAGCCTCATGTGAATTTCAAACAATATGCTGGTTATGTCACTGTCAATGAAACTCATGGAAGAGCACTGTTTTATTGGTTTTTTGAAGCCATTCATCAACCTCAACAAAAACCTCTTCTTCTTTGGCTCAATGGAGGCCCTGGTTGTTCTTCAATTGGTTATGGAGAAGCAGAGGAGCTTGGACCCTTCTTTCCCCAAAATAGCACCCAACCAAAGCTCAAGTTGAACCCTTATTCTTGGAATAAAGCTGCAAATCTTTTGTTTCTTGAATCCCCTGCTGGAGTGGGATTTTCTTACACAAACACCACCAGTGATATAAGTGAGCTTGGTGACACCATCACTGCTAAGGATTCACACACATTTCTCATCAATTGGTTTAAAAGATTTCCTCAATTCAAATCACATGACTTCTACATTGCTGGTGAAAGCTATGCAGGACACTATGTTCCACAACTTTCTGAGCTCATATTGGATAATAATCACAATCCTTCTAAGGAAGACTACATTAACTTCAAAGGGATCATGATTGGAAATGCACTATTGGACGATGAAACAGATCAAAAGGGTATGATAGAGTATGCATGGGACCATGCTGTGATATCTGATGATGTATATTATAACATCACGACCACATGCAACTTCAGTATTTCAATTCAAAGTCAAACAAATGAATGCAATACAGAACTTAACAAGTACTTTGATGTATATAAGATTATAGACATGTATAGTTTGTACACTCCCATGTGTTTCAGCAATAACAGCAACACCAAAAGGGAAGCCTTCGTCACAAGCTCATCCCCTCATTCTCTTTCCAAATTTGATGGGTGGCATAAAAGGCTAGCAGGATATGATCCATGTGCATCAGATTATACTGAATTATACCTAAATAGGCCAGAGGTACAAAAGGCATTGCATGCTAATGTCACAAAAATTCCTTATCCATGGACTCACTGCAGTGATAATATAACATTTTGGAATGACGCACCAGCATCCATGCTTCCTGTCCTAAAGAAGCTTATTGCCGGTGGTATTCGCATATGGGTTTATAGTGGAGATACTGATGGAAGAATTCCAGTAACTGCAACAAGATACACACTAAGAAAATTGGGTCTCCCTATAGTTCAAGATTGGACTCCCTGGTATACCAGCAGACAGGTAGGAGGTTGGAACATTGTATACGATGGGCTAACTTTTGTGACCATAAGAGGAGCTGGACATCAAGTTCCTACCTTTACTCCCAAGCAAGCTCTTCAGCTAGTTCGACATTTCTTAGTCAATAAGAAATTACCACAACATCCTATATAA 1428 0.3817 MGLCSLINLNIVVVVIVVLCWSKEVLGVTQQEEDRVYELPGQPHVNFKQYAGYVTVNETHGRALFYWFFEAIHQPQQKPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSTQPKLKLNPYSWNKAANLLFLESPAGVGFSYTNTTSDISELGDTITAKDSHTFLINWFKRFPQFKSHDFYIAGESYAGHYVPQLSELILDNNHNPSKEDYINFKGIMIGNALLDDETDQKGMIEYAWDHAVISDDVYYNITTTCNFSISIQSQTNECNTELNKYFDVYKIIDMYSLYTPMCFSNNSNTKREAFVTSSSPHSLSKFDGWHKRLAGYDPCASDYTELYLNRPEVQKALHANVTKIPYPWTHCSDNITFWNDAPASMLPVLKKLIAGGIRIWVYSGDTDGRIPVTATRYTLRKLGLPIVQDWTPWYTSRQVGGWNIVYDGLTFVTIRGAGHQVPTFTPKQALQLVRHFLVNKKLPQHPI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02136 475 Gene3D alpha/beta hydrolase 30 292 IPR029058 -
Car06g02136 475 PANTHER CARBOXYPEPTIDASE 27 474 - -
Car06g02136 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 474 IPR001563 GO:0004185|GO:0006508
Car06g02136 475 Gene3D - 327 364 - -
Car06g02136 475 SUPERFAMILY alpha/beta-Hydrolases 31 472 IPR029058 -
Car06g02136 475 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Car06g02136 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Car06g02136 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Car06g02136 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Car06g02136 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Car06g02136 475 Gene3D - 373 466 - -
Car06g02136 475 ProSitePatterns Serine carboxypeptidases, histidine active site. 437 454 IPR033124 GO:0004185
Car06g02136 475 Pfam Serine carboxypeptidase 41 466 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02136 Car-Chr6 21776419 21783893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02136 332 470 Calmodulin-binding Proteins AT2G22960 29.286 2.02e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02136 K16297 - gmx:100781503 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02136 06 21776419 21783893 Car06g02136 06 21776419 21783893 ECH