Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02119 ATGAATTCAACTAACTCACGGGTAGTGGATGAAGATTTTTCCATTTCTGTTCAGACTTGTGACACAGTTAGTTTGGGGCCCACAAACCCTTTAAAAGGGAAGTTTCGGGCTTCTATTGGATCTCATGAGTTTTTTAGCCCAGAGACATGGAAAGCAGCTTTTACAGAATTAGTAGCAACTGCCTCTCTAATGATCACCTTAACAAGCTCCATTATTGCATGCTTAGACTCACATGAAACCGATCCTAAGCTTATTATTCCAATTGTAGTTTTCATCATAGCCTTTTTATTCCTAATTGTTACAATTCCTCTATCCGGTGGTCACATGAGCCCTGTTTTCACATTCATAGCTGCATTAAAAGGTGTTGTCACACTTTCTCGTGCACTTCTTTACATCTTAGCACAATGCATTGGCTCAATAATTGGTTTCTATATACTCAAATGTGTCATGGACCCAAATTTAATAAATACATATTCATTAGGAGGTTGTGCTATTGGTGGCAAAGGATTAAATTCTAGTATTCATCAACATGATGCTTTATTATTGGAATTCTCTTGCACATTTTTAGTACTCTTTTTGGGTGTCACATTGGCTTTTGACAAAAAAAGGTCAAAGGATTTGGGCTTACCAATGATATGTTTGGTCATTGCTGGGGCTATGGCATTGGCAGTATTTGTGTCCATAACTGTAACTGGACGGGCCGGTTATGCTGGTGTTGGGCTGAACCCAGCTAGATGCTTAGGTGCGGCTTTGTTTCATGGAGGCTCGTTATGGAATGGGCATTGGGTTTTTTGGGTTGGGCCTATCTTGGCCTGCTTAATGTATTATAGTTTATCTATCAACCTACCAAATGAGTAG 858 0.3951 MNSTNSRVVDEDFSISVQTCDTVSLGPTNPLKGKFRASIGSHEFFSPETWKAAFTELVATASLMITLTSSIIACLDSHETDPKLIIPIVVFIIAFLFLIVTIPLSGGHMSPVFTFIAALKGVVTLSRALLYILAQCIGSIIGFYILKCVMDPNLINTYSLGGCAIGGKGLNSSIHQHDALLLEFSCTFLVLFLGVTLAFDKKRSKDLGLPMICLVIAGAMALAVFVSITVTGRAGYAGVGLNPARCLGAALFHGGSLWNGHWVFWVGPILACLMYYSLSINLPNE 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02119 285 SUPERFAMILY Aquaporin-like 49 274 IPR023271 -
Car06g02119 285 Gene3D Glycerol uptake facilitator protein. 37 281 IPR023271 -
Car06g02119 285 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02119 285 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02119 285 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02119 285 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02119 285 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g02119 285 PANTHER AQUAPORIN-LIKE 18 285 - -
Car06g02119 285 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 18 285 - -
Car06g02119 285 Pfam Major intrinsic protein 46 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02119 Car-Chr6 21640266 21642203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02119 95 272 Major Intrinsic Protein MIP AT2G37180 32.778 3.57e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02119 K09866 - gmx:100804160 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02119 06 21640266 21642203 Car06g02119 06 21640266 21642203 ECH