Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02114 ATGGAAGCTCTATTCCTTACCAAACCAGTTTCTCAGTTCAAAACCAAGCTTTCTCCAAACCCCAATTATCCATTTCTCTCCCACCACCACCAATCTTTCTCCTTCCGCCATAAAACCACCAAATTCCCCACCGCACTTCAAAACCAGGAACACCAAACAACGCCCAAAGAAACGGAAGATGAATCCTACGGCGAAGTCAAACGAATCATCGGAAGCAAAGCCCTCGAAGACGCCACCGGAATGGAGTATCTCATCGAATGGCAAGACGGCCACGCGCCGTCTTGGGTTCCCGCCGACTTCATAGCAAAAGACGTTCTCGCCGAATACGAGACTCCCTGGTGGACCGCCGCACGAAAAGCCGACGAAACAGCCCTCAAAACAATTCTCGAAGCCGATGACAATCGCGACGTCGACGCCGTAGACTCCGACGGGAGAACCGCTATCCTCTTTGTTTCCGGACTCGGCTCAGAGCCATGCGTCAAACTTTTAGCCGAAGCCGGCGCAAATCTCGACCACCGTGACAACAGCGGCGGCTTATCGGCGCTTCACATGGCAGCCGGATACGTGCGTCCCGGCGTAGCAAAACTACTCTTGGAACTCGGCGCGGATCCCGAAATCACCGACGATCGCGGAAGAACGGCGTTAGATCTTGCAAAGGAGTTATTGAAAGCAACGCCGAAGGGGAATCCGATGCAATTTGGGCGAAGAATTGGGTTAGAAGGTGTGATTAGGGTTTTGGAAGGGGCAGTGTTCGAGTACGGTGAGGTGCAGGAGATTATGGAAAACAGAGGGAAGGGTGAGAATTTGGAGTATTTGGTTATGTGGAAAGATGGTGGTGCTAATGAGTGGATTAAGGCGCGGTATGTGGCGGATGATTTGGTGAAGGATTATGAGGCTGGTCTTGAGTATGCGGTGGCGGAGACGGTGGTTGGTCGGAGAGTTGGGGATGATGGGAAATTTGAGTGTTTGGTTAAATGGGTTGATTTGGATGAGCCCACTTGGGAGCCTGAAGAGAATGTGGATCCTGAGCTTGTTAAGGTGTTTGAACTGAGTAATAATCAAGCCCAGCCCAGTACAGATAATGGGCTTTCCACGGTTGTTTCAAGTCAAGATGGCCCAACTATTGTTAGCGCATGA 1137 0.5119 MEALFLTKPVSQFKTKLSPNPNYPFLSHHHQSFSFRHKTTKFPTALQNQEHQTTPKETEDESYGEVKRIIGSKALEDATGMEYLIEWQDGHAPSWVPADFIAKDVLAEYETPWWTAARKADETALKTILEADDNRDVDAVDSDGRTAILFVSGLGSEPCVKLLAEAGANLDHRDNSGGLSALHMAAGYVRPGVAKLLLELGADPEITDDRGRTALDLAKELLKATPKGNPMQFGRRIGLEGVIRVLEGAVFEYGEVQEIMENRGKGENLEYLVMWKDGGANEWIKARYVADDLVKDYEAGLEYAVAETVVGRRVGDDGKFECLVKWVDLDEPTWEPEENVDPELVKVFELSNNQAQPSTDNGLSTVVSSQDGPTIVSA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02114 378 Gene3D - 250 299 - -
Car06g02114 378 Gene3D - 60 107 - -
Car06g02114 378 Gene3D - 108 249 IPR036770 -
Car06g02114 378 Gene3D - 300 350 - -
Car06g02114 378 SUPERFAMILY Chromo domain-like 302 349 IPR016197 -
Car06g02114 378 SMART ANK_2a 177 206 IPR002110 GO:0005515
Car06g02114 378 SMART ANK_2a 143 172 IPR002110 GO:0005515
Car06g02114 378 SMART ANK_2a 108 137 IPR002110 GO:0005515
Car06g02114 378 ProSiteProfiles Ankyrin repeat region circular profile. 177 209 - -
Car06g02114 378 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 1 355 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
Car06g02114 378 ProSiteProfiles Ankyrin repeat profile. 143 175 IPR002110 GO:0005515
Car06g02114 378 SUPERFAMILY Chromo domain-like 59 113 IPR016197 -
Car06g02114 378 SMART chromo_7 303 353 IPR000953 -
Car06g02114 378 SMART chromo_7 62 114 IPR000953 -
Car06g02114 378 SMART chromo_7 252 302 IPR000953 -
Car06g02114 378 PANTHER HOMEOBOX PROTEIN WARIAI 1 355 - -
Car06g02114 378 ProSiteProfiles Ankyrin repeat profile. 177 209 IPR002110 GO:0005515
Car06g02114 378 Pfam Ankyrin repeats (many copies) 163 218 IPR002110 GO:0005515
Car06g02114 378 CDD CD3_cpSRP43_like 301 350 - -
Car06g02114 378 SUPERFAMILY Chromo domain-like 252 300 IPR016197 -
Car06g02114 378 SUPERFAMILY Ankyrin repeat 108 220 IPR036770 -
Car06g02114 378 ProSiteProfiles Chromo and chromo shadow domain profile. 304 340 IPR000953 -
Car06g02114 378 MobiDBLite consensus disorder prediction 355 378 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02114 138 218 CAMTA Transcription Factor Family AT5G09410 39.080 1.90e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02114 K12271 - gmx:100818382 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02114 06 21602565 21604388 Car06g02114 06 21602565 21604388 ECH