Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02108 ATGGCATCAATGGAAGACATCATGATGAGTACCGAGGATATTACACTACCAGGATTTCGATTTCACCCCACAGAAGAAGAACTACTTGATTTCTATCTTAAAAATATGGTTGTTGGAAAGAAACTTCGCTTCGATGTCATTGGTTTCCTCAACATCTATCACCATGATCCTCGCGAATTGCCAGATCTGGCAAAGGTTGGAGAAAGAGAGTGGTATTTTTTCGTGCCAAGGGACAAAAAGCATGGTAGTGGAGGAAGGCCTAACCGTACAACTGAAAAGGGGTTCTGGAAAGCCACCGGTTCAGACCGGAAAATCGTGACCTTATCTGACCCGAAGCGCATAATCGGGTTGAGGAAGACCTTGGTTTTTTATGAGGGAAGAGCTCCACGTGGATGCAAAACCGATTGGGTCATGAATGAATACCGTTTACCTGACAATAGCCCCTTGCCTAAGGACATAGTGTTATGCAAGATATATAGAAAGGCAACTTCATTGAAAGTGCTAGAACAAAGGGCAGCAGAAGAGGAAGAAATGAAACAAATGGTGGGTTCCCCTGCATCCCCTCCTTCCTCTACAGACACAATCTCCTTCAGCTGCATACAACAACAAGACCAACACGTGTCCCTTCCCATGTTGTTTCTTCCTAAGAAAGAATCTGAAGCTGAAACTGAAGACATGGTTTCTCTGTCTGTGTCAACACCAAGTCATGAAAAAAGTACAAAGAACCAAATGAATGGTATTGTGAAAGATAATAACAAAAAGGGTATTTGTGGAACATCGTTGCAATTGCCCTTTGGAAAGGACAATGTGCCTGAGCTTCAGTTACCTATAGCAACGGATTGGACCCAAGATACTTTTTGGGCTCAGTTTAATAGTCCTTGGCTGCAAAACTGGACTGCTAATTCCAACATCCTCAATTTTTAA 924 0.4275 MASMEDIMMSTEDITLPGFRFHPTEEELLDFYLKNMVVGKKLRFDVIGFLNIYHHDPRELPDLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGCKTDWVMNEYRLPDNSPLPKDIVLCKIYRKATSLKVLEQRAAEEEEMKQMVGSPASPPSSTDTISFSCIQQQDQHVSLPMLFLPKKESEAETEDMVSLSVSTPSHEKSTKNQMNGIVKDNNKKGICGTSLQLPFGKDNVPELQLPIATDWTQDTFWAQFNSPWLQNWTANSNILNF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02108 307 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 307 - -
Car06g02108 307 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 8 307 - -
Car06g02108 307 MobiDBLite consensus disorder prediction 230 249 - -
Car06g02108 307 MobiDBLite consensus disorder prediction 230 251 - -
Car06g02108 307 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Car06g02108 307 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Car06g02108 307 SUPERFAMILY NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Car06g02108 307 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02108 Car-Chr6 21526014 21528597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02108 12 304 NAC Transcription Factor Family AT2G17040 56.902 2.12e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g02108 NAM 1.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02108 - - gmx:732555 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02108 06 21526014 21528597 Car06g02108 06 21526014 21528597 ECH