Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02096 ATGGAACCGTCAAACGCCGGTGACGATCATTTTTCCAACGCAAACTCAGGTTCCACGTCAGCTTTCACCTTCACCACCCCTTCCGTTTCCGGTCTCTCGAAGCCAAGATTCGTTAAACTTCGCAAACACAACAATGCCTACACCTTCAATCGCGACGGTGCCGTCGTCAATGCCGCCGCGTCCTTCCTCGGATCCGATAATCTCGATTCCTCTTCGAATTTCGATAAGCGGATCAGTGATCGATTGAGGAATCTCAAAATCGGAAGCGAGGGTTTCGCGAACGCCGATGGAAGCTTGTTCTCGACGCTTCCGGAAGAGATGATGAGTAAGTTGAAAATCGTAACGGAAAATAAAGGAGGTTTTGATAACGCACGTGTTGAATCGGAACTCGGAAACGAGTTGAAGAAGAAACTCAGCATTAAAGAAACTGAGAAAATTGGAAGAGGTAACAATGTAGTTAGTGATGATAATTCAGCTAATTCGGTTATTAACCAAATGAATAATTTGAGTGTGAATGAAAATGATGTAATGAAAAACAAGTTTAACCTAGTTGACCAAAATGTTGAACCTAATTTATGCAATTCATCTGCAATGtcatcatcatcaccatcaccatTAGCTACGGCATCCGCTTCGGCTTCTGTGTTATTTCAACCTGTTGAAGTGAATAAGAGGGATGCATTTGTGTTTCATAGTAAACCAGAAGCTTCAGGGTCATCTTTTGTTGAGTTTAAAACGCATGCGCCAAAGATTGGTGGCAAAGAAGGAAAAGTGAAGGAAAAAAGTGGCAACGTGAGAATGAATAAAAGTAGAGTGAACCTGAAGCATTCTACACAAGCACAACCTTGGAATGGACATGGTTTTGTTTTTAAAGGAAGTGTTTCACAACAAGATCAACCTCGGGGTTCTTTTGAGGCTTATTCGCCTATGGATGTCTCTCCTTATCAGGAGAAACTGGCCGAGACTCAAACCTCGAGGGAAAGTTCTGTGACATCGAATGAGTCGTTTGGTGTTGATGGTAATGATTCTGTATCGATGAGTTTTGTTGATCACATTGATGAAGATTTGATTGAGGCAACTGAGAACATGAATATAAATGAGAGTAGTGAAGTTGCGTGCGGAAGTGGAGATACAAAGGAAGGAAATTCAGAGTGTGATATACATGAAAATATTTGTGTTGATGAAGTGAAAAAGGATGAGTCTGTTTCTGGGGTTGAAACTGAAAGCTTTAAATCTGTTAGTAATAATGTGGACCTAACTAATGATTTGGCTGGTACACACGCAGAAACTGAATCCCGTGATGGGGATAGAATGTTGAATAGTTTTAGTTCGAGAAATGAAAGTGTGAGTGGGTCTGCATTCACCTTtgctgctgcttcttctgctgatgctCAATCGTCTAGCCCAAAACGCCATAACAAAAAGAAAAATTGGGTAAATGTAGGTCATGATTCTTACAACTACGTGCCAAGCATAAAGGTTCCTTATTCATCATCGTCTGTGGCATTTGCTGCGGTTTCTGGAAAGCCTCTTGTTGCAACAGGGCAAGACATAAAAGCCAAAGTGTCTTCTCCTCAACCCAAAACAAAGGATTCTGATGTGAATGAGGATTCTGTTTCTGCTGAAGCATGTGAAAAGTGGCGCCTTCGAGGGAACATTGCCTACAAGAACGGGGATTTGTCTATGGCTGAGAATTGTTACAAACAAGGACTTAGTTGTGTATCTAAAGAACAAGCATCTCGGAGCTGTCTCAGGGCTTTGCTTCTATGTTATAGCAACCTGGCTGCCACACACATGTCTCTTGGTAGGATGAGAGATGCAATAGAAGATTGTAGGCTGGCTGCTGAAATAGATCAAAATTTCCTCAAGGCGCAACTCAGAGCTGCAAATTGTTATCTTGCTCTGGGAGAAGTTGAAgatgcatcacgatatttcaaaaggtgcttgcaatcaggaactgatgtttctgtagatcgaaaaaTTGCGGTGGAAGCCTCCAATGGCTTACAAAATGCACAGAAAGTATCAGATTTCATTTATCATTCCTCGGAGCTTTTGCAAAGAAGAACATCCTCCGAAGCAGAGAGGGTATTGAAACATATTAATGAGGCATTGATGATCAGTGTGTACTCTGAAAAATTGCTTGAAATGAAAGCAGAGGCTCTTATAAGGCTGTGTAGATACGAGGAGGTGATTCAGCTGTGTGACGAGACCCTTAGTTCTGCTGAGAAGAATGCTTGTCCAATAGCTGCTGGTTGCCAAGTCACATATCTGGATAATGCAGAACTCTCAAAAGTCTTCTACTTCAGACTATGGAGATGTTCAATGATGCTTAAAGCCTATTTTCACATAGGAAAGCTTGAAGAAGGTCTTTCTTTGCTGGAACAACAAGAGGAAAAGGTGTCTGCCATTAACAAGAGTGGAAGCAAGGTTTTGGCTTCACTTATACCACTAGCTGCCACTGTATGCGAGCTCTTGCAGCATAAGACTGCAGGGAATGAAGCATATCAGGCTGGCAGACACACAGAAGCTGTTGAACACTATACATCTGTTTTATCTTGTAATGTGGAGTCTCGTCCATTTGCAGCTGTATGCTATTGTAATCGTGCCGCTGCATATAAAGCATTAGGTCAAATAACCGATGCTGTCGCAGATTGCAGTCTGGCTATAGCTCTTGATGGAAATTATTTTAAGGCACTTTCTAGACGTGCAAGTCTGTATGAGATGATCAGAGATTATTACCAAGCAGCTAATGATCTTAGGAGACTTGTCACTCTTCTCAGTAAGGGAATAGAGGATAATGCCAATCATAAAGGAACCTCTGATAGATTAATTAATTATACCAATGATTTAAAACAACATAGCATTCGGCTCTCCGAGCTAGAGGAGGAAGCCAGAAAGGAGATCCCTCTTGATATGTATCTTATTTTGGGAGTTGAACCGTCTGTTTCAATATCTGAAATCAAAAAGGCCTATCGGAAAGCTGCACTTAGACATCATCCGGATAAGGCTTGCCAGTCTTTGACAAAAAGTGACCATGGAGATGATGGAATATGGAAGGTTATTTCTGAGGAAGTACATAGAGATGCTGATAGGCTTTTCAAAATAATTGGAGAGGCATATGCTGTCTTGTCAGACCCTGCAAAGCGGGCACGGTATGATGCAGAAGAAGAAATGAGACATGCCCAAAAGAGACGCCCTGGAACTATGGGTAGAAATAATATGGAGAATCAGTATTGCCCATCTGAACAATCCAACAGGAGACAATGGAGAGAGGTTTGGAGATCATATGGTAATTCGTCTTCTCGAAGTTCTGATGCTGACCGATCAAGTAGGAAGTAA 3342 0.4039 MEPSNAGDDHFSNANSGSTSAFTFTTPSVSGLSKPRFVKLRKHNNAYTFNRDGAVVNAAASFLGSDNLDSSSNFDKRISDRLRNLKIGSEGFANADGSLFSTLPEEMMSKLKIVTENKGGFDNARVESELGNELKKKLSIKETEKIGRGNNVVSDDNSANSVINQMNNLSVNENDVMKNKFNLVDQNVEPNLCNSSAMSSSSPSPLATASASASVLFQPVEVNKRDAFVFHSKPEASGSSFVEFKTHAPKIGGKEGKVKEKSGNVRMNKSRVNLKHSTQAQPWNGHGFVFKGSVSQQDQPRGSFEAYSPMDVSPYQEKLAETQTSRESSVTSNESFGVDGNDSVSMSFVDHIDEDLIEATENMNINESSEVACGSGDTKEGNSECDIHENICVDEVKKDESVSGVETESFKSVSNNVDLTNDLAGTHAETESRDGDRMLNSFSSRNESVSGSAFTFAAASSADAQSSSPKRHNKKKNWVNVGHDSYNYVPSIKVPYSSSSVAFAAVSGKPLVATGQDIKAKVSSPQPKTKDSDVNEDSVSAEACEKWRLRGNIAYKNGDLSMAENCYKQGLSCVSKEQASRSCLRALLLCYSNLAATHMSLGRMRDAIEDCRLAAEIDQNFLKAQLRAANCYLALGEVEDASRYFKRCLQSGTDVSVDRKIAVEASNGLQNAQKVSDFIYHSSELLQRRTSSEAERVLKHINEALMISVYSEKLLEMKAEALIRLCRYEEVIQLCDETLSSAEKNACPIAAGCQVTYLDNAELSKVFYFRLWRCSMMLKAYFHIGKLEEGLSLLEQQEEKVSAINKSGSKVLASLIPLAATVCELLQHKTAGNEAYQAGRHTEAVEHYTSVLSCNVESRPFAAVCYCNRAAAYKALGQITDAVADCSLAIALDGNYFKALSRRASLYEMIRDYYQAANDLRRLVTLLSKGIEDNANHKGTSDRLINYTNDLKQHSIRLSELEEEARKEIPLDMYLILGVEPSVSISEIKKAYRKAALRHHPDKACQSLTKSDHGDDGIWKVISEEVHRDADRLFKIIGEAYAVLSDPAKRARYDAEEEMRHAQKRRPGTMGRNNMENQYCPSEQSNRRQWREVWRSYGNSSSRSSDADRSSRK 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02096 1113 MobiDBLite consensus disorder prediction 517 537 - -
Car06g02096 1113 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 12 1112 - -
Car06g02096 1113 SUPERFAMILY TPR-like 544 650 IPR011990 GO:0005515
Car06g02096 1113 PRINTS DnaJ domain signature 974 992 IPR001623 -
Car06g02096 1113 PRINTS DnaJ domain signature 992 1007 IPR001623 -
Car06g02096 1113 PRINTS DnaJ domain signature 1029 1049 IPR001623 -
Car06g02096 1113 CDD DnaJ 972 1046 IPR001623 -
Car06g02096 1113 Gene3D Tetratricopeptide repeat domain 824 947 IPR011990 GO:0005515
Car06g02096 1113 SUPERFAMILY TPR-like 828 926 IPR011990 GO:0005515
Car06g02096 1113 SUPERFAMILY Chaperone J-domain 930 1053 IPR036869 -
Car06g02096 1113 ProSiteProfiles dnaJ domain profile. 972 1057 IPR001623 -
Car06g02096 1113 SMART tpr_5 588 621 IPR019734 GO:0005515
Car06g02096 1113 SMART tpr_5 544 577 IPR019734 GO:0005515
Car06g02096 1113 SMART tpr_5 897 930 IPR019734 GO:0005515
Car06g02096 1113 SMART tpr_5 712 745 IPR019734 GO:0005515
Car06g02096 1113 SMART tpr_5 863 896 IPR019734 GO:0005515
Car06g02096 1113 SMART tpr_5 825 858 IPR019734 GO:0005515
Car06g02096 1113 SMART tpr_5 622 655 IPR019734 GO:0005515
Car06g02096 1113 MobiDBLite consensus disorder prediction 289 339 - -
Car06g02096 1113 Gene3D Tetratricopeptide repeat domain 543 815 IPR011990 GO:0005515
Car06g02096 1113 MobiDBLite consensus disorder prediction 317 339 - -
Car06g02096 1113 Coils Coil 944 964 - -
Car06g02096 1113 MobiDBLite consensus disorder prediction 1070 1105 - -
Car06g02096 1113 SMART dnaj_3 971 1049 IPR001623 -
Car06g02096 1113 Pfam DnaJ domain 972 1054 IPR001623 -
Car06g02096 1113 ProSitePatterns Nt-dnaJ domain signature. 1034 1053 IPR018253 -
Car06g02096 1113 Pfam Tetratricopeptide repeat 591 620 IPR019734 GO:0005515
Car06g02096 1113 MobiDBLite consensus disorder prediction 289 303 - -
Car06g02096 1113 Gene3D DnaJ domain 958 1078 IPR036869 -
Car06g02096 1113 MobiDBLite consensus disorder prediction 1054 1113 - -
Car06g02096 1113 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 12 1112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02096 Car-Chr6 21368153 21376757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02096 974 1055 C2H2 Transcription Factor Family AT1G74250 34.146 8.37e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02096 K09527 - gmx:100790770 1317.37