Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02081 ATGGAGATTGAAGCTGCAAGTGGTAGCAACAACAAAGGAAACAATTTTGATGAGTGTGAAGAGAAAGCATATTGTGGTATTGATAGAGGAAGTTTCTTAGCATGGGAAGATTTGAGAGTTATATTACCAAATTTTGGAAAAGGACCAACTAAAAGGATTCTTAATGGGCTTAATGGGTTTGCTGAGCCCGGTAAAATCATGGCTATTATGGGCCCTTCTGGCTCTGGAAAATCCACTTTGCTTGATTCACTTGCAGGTAGACTCTCAAAAAATGTGGTAATGACAGGAAATGTCTTTCTCAATGGGAAGAAAAAAACTCCTGGCTATGGTTTTGTTGCATACGTAACACAAGAGGATGTGTTATTAGGAACTCTTACAGTGAAGGAAACAGTATCATATTCAGCACATCTTCGTCTTCCAACAACAATGTCAAAAGAAGAAGTTAATGGTATAATAGATGGAACAATCATAGAAATGGGTCTTCAAGATTGTGCTGATAGGTTAATAGGTAATTGGCATTTGAGAGGTATAAGTGGTGGTGAAAAGAAAAGACTTAGCATTGCACTTGAGATTCTCACAAGGCCTCGCTTATTGTTTCTTGATGAACCAACTAGCGGCTTAGATAGTGCCTCTGCATTTTTTGTTGTTCAAACTCTTCGAAATGTTGCTCGTGATGGAAGGACTGTTATTTCATCGATTCATCAGCCAAGTAGTGAAGTTTTTGCTCTTTTTGATGATCTTTTCTTGCTGTCTGGCGGCGAAACTGTTTATTTTGGTGAAGCCAAAATGGCGATCGAGTTTTTTGCTGAAGCTGGTTTCCCTTGTCCACATAAAAGAAATCCTTCTGATCATTTCCTAAGATGTATCAATTCTGACTTCGACGTTGTAACGGCTACACTAAAGGGATCTCAAAGGATTCATGACACTCCAAATTCAGCAGATCCTTTCTTGAATTTGGCTACAGCAGAGATTAAGGGAATGCTACTTGAGAGATATAAGCGTTCAAAGTATGCCAGAAGGGTTAAAGACAAGATTCAAGAACAATCAACCAATATATTACAGGAAAGGGTTGAAAGTGAGACAAAATATGGAAGTCAAGCAAGTTGGTGGAAGCAACTCTCCACACTGACAAGGAGATCATTTGTGAACATGTGTAGAGATGTTGGTTACTACTGGTTGAGGATTATAATATACATCATTGTATCTATATGTGTTGGAACTATCTATTTTGATGTTGGCTATAGCTATACTTCCATTTTAGCTCGAGGCGCCTGTGGCGCTTTTATATCAGGATTCATGACTTTCATGTCAATTGGAGGCTTTCCATCCTTCATTGAAGAAATGAAGGTTTTTTATCGAGAAAGGCTTAATGGATATTACGGCGTAGCAGCATACATTTTAGCCAACTTTCTGTCTTCATTTCCATTCTTGGTAGCTATTGCTCTTACTTCCTGCACAATCACATACCACATGGTGAAATTCAGGCCAGGATTTATTCACTATGTGTTTTTCACTGTAAACATCTACGGCTGCATATCGGTGATCGAAAGCCTCATGATGGTTGTTGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATCACAGGGGCTGGAATTATTGGAATCATGATGATGACCTCAGGATTCTTTAGGTTGCTGTCTGATCTTCCAAAGCCGGTTTGGCGCTATCCAATTTCGTATATTAGTTATGGTGCATGGGCTATTCAGGGTTCATACAAGAATGACTTGCTAGGGCTTGAGTTTGATCCACTGATACCAGGTGACCCAAAATTGACAGGAGAATATGTGATAACACACATGTTAGGGATTGAATTGAGCCATTCAAAGTGGTGGGACTTAGGAGCACTATTCCTCATTCTCATATGTTACAGAATTCTGTTCTTCATTGTTCTCAAGTTCAAAGAGAGAGCATCACCATTATTTCAAACACTTTATGCAAAGAGAACATTACATCAGCTTGAGAAAAGACCTTCTTTCAGGAAAATGCCTTCTTTTCCTTCATTGAGGCATCAACCACTTCATTCATTGTCTTCTCAAGAGGGTCTTGATTCTCCACTCCAATAA 2085 0.3904 MEIEAASGSNNKGNNFDECEEKAYCGIDRGSFLAWEDLRVILPNFGKGPTKRILNGLNGFAEPGKIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVFLNGKKKTPGYGFVAYVTQEDVLLGTLTVKETVSYSAHLRLPTTMSKEEVNGIIDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAIEFFAEAGFPCPHKRNPSDHFLRCINSDFDVVTATLKGSQRIHDTPNSADPFLNLATAEIKGMLLERYKRSKYARRVKDKIQEQSTNILQERVESETKYGSQASWWKQLSTLTRRSFVNMCRDVGYYWLRIIIYIIVSICVGTIYFDVGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTSCTITYHMVKFRPGFIHYVFFTVNIYGCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGSYKNDLLGLEFDPLIPGDPKLTGEYVITHMLGIELSHSKWWDLGALFLILICYRILFFIVLKFKERASPLFQTLYAKRTLHQLEKRPSFRKMPSFPSLRHQPLHSLSSQEGLDSPLQ 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02081 694 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 277 IPR003439 GO:0005524
Car06g02081 694 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 30 689 - -
Car06g02081 694 Pfam ABC-2 type transporter 372 581 IPR013525 GO:0016020|GO:0140359
Car06g02081 694 MobiDBLite consensus disorder prediction 677 694 - -
Car06g02081 694 MobiDBLite consensus disorder prediction 670 694 - -
Car06g02081 694 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 30 689 - -
Car06g02081 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 267 IPR027417 -
Car06g02081 694 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Car06g02081 694 Gene3D - 35 271 IPR027417 -
Car06g02081 694 CDD ABCG_EPDR 30 259 - -
Car06g02081 694 Pfam ABC transporter 56 205 IPR003439 GO:0005524
Car06g02081 694 SMART AAA_5 63 234 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02081 Car-Chr6 21174073 21181727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02081 37 246 Calmodulin-binding Proteins AT2G36910 29.437 1.14e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02081 K05681 - gmx:100777598 1209.13